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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g559150v5   uncharacterized protein 
 osa-u.5   4327408   ATP-dependent Clp protease adapter protein CLPS2, chloroplastic 
 ppo-u.5   7457850   ATP-dependent Clp protease adapter protein CLPS2, chloroplastic 
 ppo-u.5   7459064   ATP-dependent Clp protease adapter protein CLPS2, chloroplastic 
 tae-r.2   123079648   ATP-dependent Clp protease adapter protein CLPS2, chloroplastic 
 tae-r.2   123071307   ATP-dependent Clp protease adapter protein CLPS2, chloroplastic 
 tae-r.2   123062501   ATP-dependent Clp protease adapter protein CLPS2, chloroplastic 
 hvu-r.1   123444975   ATP-dependent Clp protease adapter protein CLPS2, chloroplastic-like 
 ghi-r.1   107903784   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 ghi-r.1   107914711   ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 
 cit-r.1   102615525   ATP-dependent Clp protease adapter protein CLPS2, chloroplastic-like 

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Top 50 coexpressed genes to CHLRE_12g559150v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g559150v5 (cre-r.1 coexpression data)

CoexMap"5728390"


creCHLRE_12g559150v5 | Entrez gene ID : 5728390      
Species cre osa ppo tae hvu ghi cit sbi gma sot sly mtr bra ath bna vvi zma nta bdi
Paralog 1 1 2 3 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006508 [list] [network] proteolysis  (404 genes)  IEA  
GO CC
GO MF
Protein XP_001702813.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_001702813.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_001702813.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g559150v5
osa-u.5
for
4327408
ppo-u.5
for
7457850
ppo-u.5
for
7459064
tae-r.2
for
123079648
tae-r.2
for
123071307
tae-r.2
for
123062501
hvu-r.1
for
123444975
ghi-r.1
for
107903784
ghi-r.1
for
107914711
cit-r.1
for
102615525


Ortholog ID: 14984
Species cre osa ppo ppo tae tae tae hvu ghi ghi cit
Symbol CHLRE_12g559150v5 LOC4327408 LOC7457850 LOC7459064 LOC123079648 LOC123071307 LOC123062501 LOC123444975 LOC107903784 LOC107914711 LOC102615525
Function* uncharacterized protein ATP-dependent Clp protease adapter protein CLPS2, chloroplastic ATP-dependent Clp protease adapter protein CLPS2, chloroplastic ATP-dependent Clp protease adapter protein CLPS2, chloroplastic ATP-dependent Clp protease adapter protein CLPS2, chloroplastic ATP-dependent Clp protease adapter protein CLPS2, chloroplastic ATP-dependent Clp protease adapter protein CLPS2, chloroplastic ATP-dependent Clp protease adapter protein CLPS2, chloroplastic-like ATP-dependent Clp protease adapter protein CLPS1, chloroplastic ATP-dependent Clp protease adapter protein CLPS1, chloroplastic ATP-dependent Clp protease adapter protein CLPS2, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 3
cre03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
ppo04626 Plant-pathogen interaction 3
ppo03018 RNA degradation 2
ppo03040 Spliceosome 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae03040 Spliceosome 4
tae04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae03040 Spliceosome 2
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 6
hvu04626 Plant-pathogen interaction 3
hvu03040 Spliceosome 3
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi00730 Thiamine metabolism 4
ghi01232 Nucleotide metabolism 4
ghi01240 Biosynthesis of cofactors 4
ghi03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi00230 Purine metabolism 2
ghi00730 Thiamine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5728390 4327408 7457850 7459064 123079648 123071307 123062501 123444975 107903784 107914711 102615525
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