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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g181500v5   uncharacterized protein 
 ath-u.5   DPE1   disproportionating enzyme 
 gma-u.5   100795007   4-alpha-glucanotransferase, chloroplastic/amyloplastic 
 gma-u.5   100785271   4-alpha-glucanotransferase, chloroplastic/amyloplastic 
 sly-u.5   101250983   4-alpha-glucanotransferase, chloroplastic/amyloplastic 
 osa-u.5   4343975   4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic-like 
 zma-u.5   100381522   uncharacterized LOC100381522 
 bra-r.6   103837558   4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic 
 vvi-u.5   100259462   4-alpha-glucanotransferase, chloroplastic/amyloplastic 
 ppo-u.5   7456959   4-alpha-glucanotransferase, chloroplastic/amyloplastic 
 mtr-u.5   11440463   4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic 
 tae-r.2   123052006   4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic 
 tae-r.2   123044125   4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic 
 tae-r.2   780606   4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic 
 hvu-r.1   123425210   4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic 
 ghi-r.1   107950372   4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic 
 ghi-r.1   121210124   4-alpha-glucanotransferase, chloroplastic/amyloplastic 
 bna-r.1   125593353   4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic 
 bna-r.1   106414552   4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic 
 sbi-r.1   8079356   4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic 
 sot-r.1   102595076   4-alpha-glucanotransferase, chloroplastic/amyloplastic-like 
 cit-r.1   102627737   4-alpha-glucanotransferase, chloroplastic/amyloplastic 
 bdi-r.1   100839794   4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic 
 nta-r.1   107803132   4-alpha-glucanotransferase, chloroplastic/amyloplastic 

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Top 50 coexpressed genes to CHLRE_03g181500v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g181500v5 (cre-r.1 coexpression data)

CoexMap"5728451"


creCHLRE_03g181500v5 | Entrez gene ID : 5728451      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 1 1 1 1 3 1 2 2 1 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00500 [list] [network] Starch and sucrose metabolism (47 genes)
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (185 genes)  IEA  
GO CC
GO MF
GO:0004134 [list] [network] 4-alpha-glucanotransferase activity  (2 genes)  IEA  
Protein XP_001702911.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  chlo_mito 5,  mito 4  (predict for XP_001702911.1)
Subcellular
localization
TargetP
mito 7,  chlo 5  (predict for XP_001702911.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g181500v5
ath-u.5
for
DPE1
gma-u.5
for
100795007
gma-u.5
for
100785271
sly-u.5
for
101250983
osa-u.5
for
4343975
zma-u.5
for
100381522
bra-r.6
for
103837558
vvi-u.5
for
100259462
ppo-u.5
for
7456959
mtr-u.5
for
11440463
tae-r.2
for
123052006
tae-r.2
for
123044125
tae-r.2
for
780606
hvu-r.1
for
123425210
ghi-r.1
for
107950372
ghi-r.1
for
121210124
bna-r.1
for
125593353
bna-r.1
for
106414552
sbi-r.1
for
8079356
sot-r.1
for
102595076
cit-r.1
for
102627737
bdi-r.1
for
100839794
nta-r.1
for
107803132


Ortholog ID: 11020
Species cre ath gma gma sly osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta
Symbol CHLRE_03g181500v5 DPE1 LOC100795007 LOC100785271 LOC101250983 LOC4343975 LOC100381522 LOC103837558 LOC100259462 LOC7456959 LOC11440463 LOC123052006 LOC123044125 LOC780606 LOC123425210 LOC107950372 LOC121210124 LOC125593353 LOC106414552 LOC8079356 LOC102595076 LOC102627737 LOC100839794 LOC107803132
Function* uncharacterized protein disproportionating enzyme 4-alpha-glucanotransferase, chloroplastic/amyloplastic 4-alpha-glucanotransferase, chloroplastic/amyloplastic 4-alpha-glucanotransferase, chloroplastic/amyloplastic 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic-like uncharacterized LOC100381522 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic 4-alpha-glucanotransferase, chloroplastic/amyloplastic 4-alpha-glucanotransferase, chloroplastic/amyloplastic 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic 4-alpha-glucanotransferase, chloroplastic/amyloplastic 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic 4-alpha-glucanotransferase, chloroplastic/amyloplastic-like 4-alpha-glucanotransferase, chloroplastic/amyloplastic 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic 4-alpha-glucanotransferase, chloroplastic/amyloplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 3
cre00500 Starch and sucrose metabolism 3
cre00010 Glycolysis / Gluconeogenesis 2
cre00030 Pentose phosphate pathway 2
cre00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 6
gma01200 Carbon metabolism 4
gma00061 Fatty acid biosynthesis 3
gma00620 Pyruvate metabolism 3
gma01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma01230 Biosynthesis of amino acids 3
gma01240 Biosynthesis of cofactors 3
gma00030 Pentose phosphate pathway 2
gma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 6
sly00520 Amino sugar and nucleotide sugar metabolism 4
sly01250 Biosynthesis of nucleotide sugars 4
sly00010 Glycolysis / Gluconeogenesis 3
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 8
osa00520 Amino sugar and nucleotide sugar metabolism 2
osa01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 9
zma00520 Amino sugar and nucleotide sugar metabolism 2
zma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 5
vvi00730 Thiamine metabolism 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 4
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae04075 Plant hormone signal transduction 3
tae04626 Plant-pathogen interaction 3
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04144 Endocytosis 3
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 17
ghi00520 Amino sugar and nucleotide sugar metabolism 4
ghi01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 10
ghi00520 Amino sugar and nucleotide sugar metabolism 4
ghi01250 Biosynthesis of nucleotide sugars 4
ghi00061 Fatty acid biosynthesis 2
ghi01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
bna00750 Vitamin B6 metabolism 2
bna01240 Biosynthesis of cofactors 2
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
bna00750 Vitamin B6 metabolism 2
bna01240 Biosynthesis of cofactors 2
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 7
sbi00190 Oxidative phosphorylation 5
sbi00620 Pyruvate metabolism 3
sbi01200 Carbon metabolism 3
sbi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 10
sot00520 Amino sugar and nucleotide sugar metabolism 3
sot01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
bdi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 3
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta00790 Folate biosynthesis 2
nta04981 Folate transport and metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5728451 836609 100795007 100785271 101250983 4343975 100381522 103837558 100259462 7456959 11440463 123052006 123044125 780606 123425210 107950372 121210124 125593353 106414552 8079356 102595076 102627737 100839794 107803132
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