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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g545177v5   uncharacterized protein 
 ath-u.5   AT3G01800   Ribosome recycling factor 
 gma-u.5   100814905   putative ribosome-recycling factor 
 sly-u.5   101257624   uncharacterized LOC101257624 
 osa-u.5   4336241   uncharacterized LOC4336241 
 zma-u.5   100282734   uncharacterized LOC100282734 
 vvi-u.5   100249298   uncharacterized LOC100249298 
 ppo-u.5   7456219   uncharacterized LOC7456219 
 mtr-u.5   11445266   ribosome-recycling factor 

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Top 50 coexpressed genes to CHLRE_12g545177v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g545177v5 (cre-r.1 coexpression data)

CoexMap"5728569"


creCHLRE_12g545177v5 | Entrez gene ID : 5728569      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006412 [list] [network] translation  (268 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (441 genes)  IEA  
GO MF
GO:0043023 [list] [network] ribosomal large subunit binding  (10 genes)  IEA  
Protein XP_042919248.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 3,  cyto_mito 3,  mito_plas 3  (predict for XP_042919248.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_042919248.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g545177v5

.
ath-u.5
for
AT3G01800

.
gma-u.5
for
100814905

.
sly-u.5
for
101257624

.
osa-u.5
for
4336241

.
zma-u.5
for
100282734

.
vvi-u.5
for
100249298

.
ppo-u.5
for
7456219

.
mtr-u.5
for
11445266

.


Ortholog ID: 9485
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi bdi nta nta
Symbol AT3G01800 LOC100814905 LOC101257624 LOC4336241 LOC100282734 LOC103858889 LOC100249298 LOC7456219 LOC11445266 LOC123189609 LOC123053730 LOC123427085 LOC121214013 LOC107921070 LOC106388688 LOC106438874 CHLRE_12g545177v5 LOC8073704 LOC102584339 LOC102621071 LOC100834456 LOC100835288 LOC107772061 LOC107771345
Function* Ribosome recycling factor putative ribosome-recycling factor uncharacterized LOC101257624 uncharacterized LOC4336241 uncharacterized LOC100282734 ribosome-recycling factor uncharacterized LOC100249298 uncharacterized LOC7456219 ribosome-recycling factor ribosome-recycling factor ribosome-recycling factor ribosome-recycling factor ribosome-recycling factor ribosome-recycling factor ribosome-recycling factor ribosome-recycling factor uncharacterized protein ribosome-recycling factor ribosome-recycling factor uncharacterized LOC102621071 ribosome-recycling factor ribosome-recycling factor uncharacterized LOC107772061 uncharacterized LOC107771345
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
bra03040 Spliceosome 3
bra04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae04626 Plant-pathogen interaction 3
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi03010 Ribosome 4
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 4
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 3
nta03060 Protein export 2
nta03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821076 100814905 101257624 4336241 100282734 103858889 100249298 7456219 11445266 123189609 123053730 123427085 121214013 107921070 106388688 106438874 5728569 8073704 102584339 102621071 100834456 100835288 107772061 107771345
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