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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g515900v5   uncharacterized protein 
 ath-u.5   MEI1   transcription coactivator 
 gma-u.5   100804966   DNA topoisomerase 2-binding protein 1-A 
 sly-u.5   101256914   uncharacterized LOC101256914 
 osa-u.5   4349978   uncharacterized LOC4349978 
 zma-u.5   103646962   DNA topoisomerase 2-binding protein 1 
 vvi-u.5   100260958   uncharacterized LOC100260958 
 ppo-u.5   18099602   uncharacterized LOC18099602 
 mtr-u.5   25482443   DNA topoisomerase 2-binding protein 1 
 mtr-u.5   11414828   DNA topoisomerase 2-binding protein 1 

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Top 50 coexpressed genes to CHLRE_12g515900v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g515900v5 (cre-r.1 coexpression data)

CoexMap"5728771"


creCHLRE_12g515900v5 | Entrez gene ID : 5728771    
Species cre ath gma sly osa zma vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi sbi
Paralog 1 1 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007095 [list] [network] mitotic G2 DNA damage checkpoint signaling  (5 genes)  IEA  
GO:0033314 [list] [network] mitotic DNA replication checkpoint signaling  (8 genes)  IEA  
GO:0006270 [list] [network] DNA replication initiation  (20 genes)  IEA  
GO CC
GO MF
Protein XP_001703232.2 [sequence] [blastp]
Subcellular
localization
wolf
pero 4,  cyto 4,  chlo 2  (predict for XP_001703232.2)
Subcellular
localization
TargetP
other 7  (predict for XP_001703232.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g515900v5

.
ath-u.5
for
MEI1

.
gma-u.5
for
100804966

.
sly-u.5
for
101256914

.
osa-u.5
for
4349978

.
zma-u.5
for
103646962

.
vvi-u.5
for
100260958

.
ppo-u.5
for
18099602

.
mtr-u.5
for
25482443

.
mtr-u.5
for
11414828

.


Ortholog ID: 9885
Species ath gma sly osa zma bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol MEI1 LOC100804966 LOC101256914 LOC4349978 LOC103646962 LOC103832186 LOC100260958 LOC18099602 LOC11414828 LOC25482443 LOC123086706 LOC123091315 LOC123447926 LOC107903981 LOC107952113 LOC106362662 LOC106354613 CHLRE_12g515900v5 LOC8074306 LOC102589639 LOC102622944 LOC100825762 LOC107766582 LOC107794754
Function* transcription coactivator DNA topoisomerase 2-binding protein 1-A uncharacterized LOC101256914 uncharacterized LOC4349978 DNA topoisomerase 2-binding protein 1 DNA topoisomerase 2-binding protein 1-A uncharacterized LOC100260958 uncharacterized LOC18099602 DNA topoisomerase 2-binding protein 1 DNA topoisomerase 2-binding protein 1 DNA topoisomerase 2-binding protein 1-A DNA topoisomerase 2-binding protein 1-A DNA topoisomerase 2-binding protein 1 DNA topoisomerase 2-binding protein 1 DNA topoisomerase 2-binding protein 1-A DNA topoisomerase 2-binding protein 1-A-like DNA topoisomerase 2-binding protein 1-A uncharacterized protein DNA topoisomerase 2-binding protein 1 DNA topoisomerase 2-binding protein 1 uncharacterized LOC102622944 DNA topoisomerase 2-binding protein 1 uncharacterized LOC107766582 uncharacterized LOC107794754
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 6
ath03440 Homologous recombination 4
ath03410 Base excision repair 4
ath03430 Mismatch repair 4
ath03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03460 Fanconi anemia pathway 2
osa03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 3
zma03040 Spliceosome 3
zma03430 Mismatch repair 2
zma03030 DNA replication 2
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03460 Fanconi anemia pathway 3
bra03030 DNA replication 3
bra03440 Homologous recombination 3
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03460 Fanconi anemia pathway 3
vvi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03460 Fanconi anemia pathway 2
ppo03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 10
tae03430 Mismatch repair 6
tae03460 Fanconi anemia pathway 5
tae03030 DNA replication 5
tae03410 Base excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 7
tae03440 Homologous recombination 7
tae00310 Lysine degradation 3
tae03460 Fanconi anemia pathway 3
tae03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03030 DNA replication 2
hvu03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 2
bna00052 Galactose metabolism 2
bna00511 Other glycan degradation 2
bna00531 Glycosaminoglycan degradation 2
bna00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 2
bna00052 Galactose metabolism 2
bna00511 Other glycan degradation 2
bna00531 Glycosaminoglycan degradation 2
bna00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03460 Fanconi anemia pathway 2
sot03440 Homologous recombination 2
sot03030 DNA replication 2
sot03410 Base excision repair 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03450 Non-homologous end-joining 2
nta03440 Homologous recombination 2
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844068 100804966 101256914 4349978 103646962 103832186 100260958 18099602 11414828 25482443 123086706 123091315 123447926 107903981 107952113 106362662 106354613 5728771 8074306 102589639 102622944 100825762 107766582 107794754
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