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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g178300v5   uncharacterized protein 
 ath-u.5   ATSRL1   PRP38 family protein 
 gma-u.5   100793812   pre-mRNA splicing factor SR-like 1 
 gma-u.5   100788237   pre-mRNA splicing factor SR-like 1 
 sly-u.5   101266210   pre-mRNA splicing factor SR-like 1 
 osa-u.5   4337972   pre-mRNA splicing factor SR-like 1 
 zma-u.5   100383017   PRP38 family protein 
 zma-u.5   100191198   uncharacterized LOC100191198 
 vvi-u.5   100267328   pre-mRNA splicing factor SR-like 1 
 ppo-u.5   18106495   pre-mRNA splicing factor SR-like 1 
 ppo-u.5   7494516   pre-mRNA splicing factor SR-like 1 
 mtr-u.5   11436892   pre-mRNA splicing factor SR-like 1 

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Top 50 coexpressed genes to CHLRE_03g178300v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g178300v5 (cre-r.1 coexpression data)

CoexMap"5728818"


creCHLRE_03g178300v5 | Entrez gene ID : 5728818      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 2 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03040 [list] [network] Spliceosome (105 genes)
GO BP
GO CC
GO:0071011 [list] [network] precatalytic spliceosome  (26 genes)  IEA  
GO MF
Protein XP_001703418.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_001703418.1)
Subcellular
localization
TargetP
other 8  (predict for XP_001703418.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g178300v5

.
ath-u.5
for
ATSRL1

.
gma-u.5
for
100793812

.
gma-u.5
for
100788237

.
sly-u.5
for
101266210

.
osa-u.5
for
4337972

.
zma-u.5
for
100383017

.
zma-u.5
for
100191198

.
vvi-u.5
for
100267328

.
ppo-u.5
for
18106495

.
ppo-u.5
for
7494516

.
mtr-u.5
for
11436892

.


Ortholog ID: 6661
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit bdi bdi nta nta
Symbol ATSRL1 LOC100788237 LOC100793812 LOC101266210 LOC4337972 LOC100383017 LOC100191198 LOC103863710 LOC100267328 LOC7494516 LOC18106495 LOC11436892 LOC123164503 LOC123087983 LOC123407023 LOC123426779 LOC107915621 LOC107950451 LOC106435494 LOC106445026 CHLRE_03g178300v5 LOC8072720 LOC8070722 LOC102596091 LOC102623605 LOC100827913 LOC100841527 LOC107807042 LOC107819133
Function* PRP38 family protein pre-mRNA splicing factor SR-like 1 pre-mRNA splicing factor SR-like 1 pre-mRNA splicing factor SR-like 1 pre-mRNA splicing factor SR-like 1 PRP38 family protein uncharacterized LOC100191198 pre-mRNA splicing factor SR-like 1 pre-mRNA splicing factor SR-like 1 pre-mRNA splicing factor SR-like 1 pre-mRNA splicing factor SR-like 1 pre-mRNA splicing factor SR-like 1 pre-mRNA splicing factor SR-like 1 pre-mRNA splicing factor SR-like 1 pre-mRNA splicing factor SR-like 1 pre-mRNA splicing factor SR-like 1 pre-mRNA splicing factor SR-like 1 pre-mRNA splicing factor SR-like 1 pre-mRNA splicing factor SR-like 1 pre-mRNA splicing factor SR-like 1 uncharacterized protein pre-mRNA splicing factor SR-like 1 pre-mRNA splicing factor SR-like 1 pre-mRNA-splicing factor 38B pre-mRNA splicing factor SR-like 1 pre-mRNA splicing factor SR-like 1 pre-mRNA splicing factor SR-like 1 pre-mRNA splicing factor SR-like 1 pre-mRNA splicing factor SR-like 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 7
ppo03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03420 Nucleotide excision repair 2
bna04120 Ubiquitin mediated proteolysis 2
bna03040 Spliceosome 2
bna04141 Protein processing in endoplasmic reticulum 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
bna03420 Nucleotide excision repair 2
bna04120 Ubiquitin mediated proteolysis 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi04075 Plant hormone signal transduction 2
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 7
cit03013 Nucleocytoplasmic transport 2
cit03022 Basal transcription factors 2
cit03420 Nucleotide excision repair 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 833711 100788237 100793812 101266210 4337972 100383017 100191198 103863710 100267328 7494516 18106495 11436892 123164503 123087983 123407023 123426779 107915621 107950451 106435494 106445026 5728818 8072720 8070722 102596091 102623605 100827913 100841527 107807042 107819133
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