ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_08g358526v5	uncharacterized protein
cre-r.1	CHLRE_13g581400v5	uncharacterized protein
ath-u.5	ATNTT2	TLC ATP/ADP transporter
ath-u.5	NTT1	nucleotide transporter 1
gma-u.5	100777154	ADP,ATP carrier protein 1, chloroplastic
gma-u.5	100778352	ADP,ATP carrier protein 1, chloroplastic
gma-u.5	100793284	ADP,ATP carrier protein 1, chloroplastic
sly-u.5	101263496	plastidic ATP/ADP-transporter
sly-u.5	101254581	plastidic ATP/ADP-transporter-like
osa-u.5	4328685	plastidic ATP/ADP-transporter
osa-u.5	4325928	ADP,ATP carrier protein 2, chloroplastic
zma-u.5	103637385	ADP,ATP carrier protein 2, chloroplastic
zma-u.5	100272602	uncharacterized LOC100272602
zma-u.5	100281461	plastidic ATP/ADP-transporter
bra-r.6	103832497	ADP,ATP carrier protein 1, chloroplastic
bra-r.6	103836023	ADP,ATP carrier protein 2, chloroplastic
bra-r.6	103830429	ADP,ATP carrier protein 1, chloroplastic
vvi-u.5	100258352	plastidic ATP/ADP-transporter
ppo-u.5	7486621	plastidic ATP/ADP-transporter
mtr-u.5	11425887	ADP,ATP carrier protein 1, chloroplastic
mtr-u.5	25491350	plastidic ATP/ADP-transporter
tae-r.2	123078667	plastidic ATP/ADP-transporter
tae-r.2	123061594	plastidic ATP/ADP-transporter
tae-r.2	123070225	plastidic ATP/ADP-transporter
hvu-r.1	123443971	plastidic ATP/ADP-transporter-like
hvu-r.1	123401970	plastidic ATP/ADP-transporter-like
ghi-r.1	107949564	plastidic ATP/ADP-transporter
ghi-r.1	107943394	plastidic ATP/ADP-transporter
ghi-r.1	121229341	ADP,ATP carrier protein 1, chloroplastic
bna-r.1	106445944	ADP,ATP carrier protein 1, chloroplastic
bna-r.1	106405814	ADP,ATP carrier protein 2, chloroplastic
bna-r.1	106346652	ADP,ATP carrier protein 2, chloroplastic
sbi-r.1	8082940	ADP,ATP carrier protein 1, chloroplastic
sbi-r.1	8058234	ADP,ATP carrier protein 2, chloroplastic
sot-r.1	102584892	plastidic ATP/ADP-transporter
sot-r.1	102605062	plastidic ATP/ADP-transporter-like
cit-r.1	102622604	plastidic ATP/ADP-transporter
bdi-r.1	100824703	plastidic ATP/ADP-transporter
bdi-r.1	100830112	plastidic ATP/ADP-transporter
nta-r.1	107832462	plastidic ATP/ADP-transporter
nta-r.1	107792921	plastidic ATP/ADP-transporter-like
nta-r.1	107795522	plastidic ATP/ADP-transporter

Top 50 coexpressed genes to CHLRE_08g358526v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_08g358526v5 (cre-r.1 coexpression data)

CoexMap"5729256"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006862 [list] [network] nucleotide transport

(10 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(1543 genes)

IEA

GO MF

GO:0005471 [list] [network] ATP:ADP antiporter activity

(6 genes)

IEA

Protein

XP_001703733.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 7, chlo 1, cyto 1, E.R. 1, chlo_mito 1, cyto_E.R. 1

(predict for XP_001703733.1)

Subcellular
localization
TargetP

mito 6

(predict for XP_001703733.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_08g358526v5	cre-r.1 for CHLRE_13g581400v5	ath-u.5 for ATNTT2	ath-u.5 for NTT1	gma-u.5 for 100777154	gma-u.5 for 100778352	gma-u.5 for 100793284	sly-u.5 for 101263496	sly-u.5 for 101254581	osa-u.5 for 4328685	osa-u.5 for 4325928	zma-u.5 for 103637385	zma-u.5 for 100272602	zma-u.5 for 100281461	bra-r.6 for 103832497	bra-r.6 for 103836023	bra-r.6 for 103830429	vvi-u.5 for 100258352	ppo-u.5 for 7486621	mtr-u.5 for 11425887	mtr-u.5 for 25491350	tae-r.2 for 123078667	tae-r.2 for 123061594	tae-r.2 for 123070225	hvu-r.1 for 123443971	hvu-r.1 for 123401970	ghi-r.1 for 107949564	ghi-r.1 for 107943394	ghi-r.1 for 121229341	bna-r.1 for 106445944	bna-r.1 for 106405814	bna-r.1 for 106346652	sbi-r.1 for 8082940	sbi-r.1 for 8058234	sot-r.1 for 102584892	sot-r.1 for 102605062	cit-r.1 for 102622604	bdi-r.1 for 100824703	bdi-r.1 for 100830112	nta-r.1 for 107832462	nta-r.1 for 107792921	nta-r.1 for 107795522

Ortholog

Ortholog ID: 2856

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

CHLRE_08g358526v5

CHLRE_13g581400v5

ATNTT2

NTT1

Function^*

uncharacterized protein

TLC ATP/ADP transporter

nucleotide transporter 1

ADP,ATP carrier protein 1, chloroplastic

plastidic ATP/ADP-transporter

plastidic ATP/ADP-transporter-like

plastidic ATP/ADP-transporter

ADP,ATP carrier protein 2, chloroplastic

uncharacterized LOC100272602

plastidic ATP/ADP-transporter

ADP,ATP carrier protein 2, chloroplastic

ADP,ATP carrier protein 1, chloroplastic

ADP,ATP carrier protein 2, chloroplastic

plastidic ATP/ADP-transporter

ADP,ATP carrier protein 1, chloroplastic

plastidic ATP/ADP-transporter

plastidic ATP/ADP-transporter-like

ADP,ATP carrier protein 1, chloroplastic

ADP,ATP carrier protein 2, chloroplastic

ADP,ATP carrier protein 2, chloroplastic-like

ADP,ATP carrier protein 1, chloroplastic

ADP,ATP carrier protein 2, chloroplastic

plastidic ATP/ADP-transporter

plastidic ATP/ADP-transporter-like

plastidic ATP/ADP-transporter

plastidic ATP/ADP-transporter-like

plastidic ATP/ADP-transporter

plastidic ATP/ADP-transporter-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01200	Carbon metabolism	6
cre01230	Biosynthesis of amino acids	4
cre00620	Pyruvate metabolism	4
cre00220	Arginine biosynthesis	3
cre00250	Alanine, aspartate and glutamate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01200	Carbon metabolism	5
cre01230	Biosynthesis of amino acids	4
cre00500	Starch and sucrose metabolism	4
cre00030	Pentose phosphate pathway	4
cre00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00620	Pyruvate metabolism	5
ath01200	Carbon metabolism	5
ath00010	Glycolysis / Gluconeogenesis	4
ath00020	Citrate cycle (TCA cycle)	2
ath00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00920	Sulfur metabolism	6
ath01320	Sulfur cycle	4
ath00230	Purine metabolism	3
ath00261	Monobactam biosynthesis	2
ath00450	Selenocompound metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00030	Pentose phosphate pathway	3
gma00480	Glutathione metabolism	3
gma01200	Carbon metabolism	3
gma00250	Alanine, aspartate and glutamate metabolism	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04712	Circadian rhythm - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01240	Biosynthesis of cofactors	3
gma01200	Carbon metabolism	3
gma00250	Alanine, aspartate and glutamate metabolism	2
gma00240	Pyrimidine metabolism	2
gma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	3
sly00010	Glycolysis / Gluconeogenesis	2
sly00051	Fructose and mannose metabolism	2
sly00052	Galactose metabolism	2
sly00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01230	Biosynthesis of amino acids	13
osa00400	Phenylalanine, tyrosine and tryptophan biosynthesis	8
osa01200	Carbon metabolism	8
osa00270	Cysteine and methionine metabolism	4
osa00710	Carbon fixation by Calvin cycle	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00230	Purine metabolism	4
zma01240	Biosynthesis of cofactors	3
zma01200	Carbon metabolism	2
zma00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01200	Carbon metabolism	6
zma00020	Citrate cycle (TCA cycle)	4
zma01210	2-Oxocarboxylic acid metabolism	4
zma00620	Pyruvate metabolism	3
zma00630	Glyoxylate and dicarboxylate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	6
bra04145	Phagosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00561	Glycerolipid metabolism	3
mtr04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01230	Biosynthesis of amino acids	11
tae00260	Glycine, serine and threonine metabolism	7
tae01200	Carbon metabolism	7
tae01240	Biosynthesis of cofactors	6
tae00270	Cysteine and methionine metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01230	Biosynthesis of amino acids	11
tae00400	Phenylalanine, tyrosine and tryptophan biosynthesis	7
tae00260	Glycine, serine and threonine metabolism	5
tae01200	Carbon metabolism	4
tae00592	alpha-Linolenic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01230	Biosynthesis of amino acids	11
tae00260	Glycine, serine and threonine metabolism	7
tae01200	Carbon metabolism	7
tae00270	Cysteine and methionine metabolism	6
tae01240	Biosynthesis of cofactors	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01230	Biosynthesis of amino acids	9
hvu00400	Phenylalanine, tyrosine and tryptophan biosynthesis	8
hvu00260	Glycine, serine and threonine metabolism	3
hvu00480	Glutathione metabolism	2
hvu00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00230	Purine metabolism	2
hvu01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00904	Diterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00730	Thiamine metabolism	2
sbi01240	Biosynthesis of cofactors	2
sbi00500	Starch and sucrose metabolism	2
sbi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01200	Carbon metabolism	8
sbi00030	Pentose phosphate pathway	6
sbi00710	Carbon fixation by Calvin cycle	6
sbi01230	Biosynthesis of amino acids	6
sbi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	7
sot00520	Amino sugar and nucleotide sugar metabolism	3
sot01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	6
sot00520	Amino sugar and nucleotide sugar metabolism	3
sot01250	Biosynthesis of nucleotide sugars	3
sot00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01230	Biosynthesis of amino acids	9
bdi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	5
bdi00260	Glycine, serine and threonine metabolism	4
bdi01200	Carbon metabolism	4
bdi00270	Cysteine and methionine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04712	Circadian rhythm - plant	4
nta04016	MAPK signaling pathway - plant	2
nta04075	Plant hormone signal transduction	2
nta00030	Pentose phosphate pathway	2
nta00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04712	Circadian rhythm - plant	4
nta04016	MAPK signaling pathway - plant	2
nta04075	Plant hormone signal transduction	2
nta00030	Pentose phosphate pathway	2
nta00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04712	Circadian rhythm - plant	4
nta00970	Aminoacyl-tRNA biosynthesis	2
nta04016	MAPK signaling pathway - plant	2
nta04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

5729256

5719323

838120

844370

100777154

100778352

100793284

101263496

101254581

4328685

4325928

103637385

100272602

100281461

103836023

103830429

103872345

100258352

7486621

11425887

25491350

123078667

123061594

123070225

123443971

123401970

121229341

107906470

107897222

106445944

106346652

106387564

8082940

8058234

102584892

102605062

102622604

100824703

100830112

107792921

107795522

107830888

The preparation time of this page was 1.7 [sec].


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	2	2	3	2	2	3	3	1	1	2	3	2	3	3	2	2	1	2	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_08g358526v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_08g358526v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**