ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_06g285850v5	uncharacterized protein
ath-u.5	AT5G11810	rhomboid family protein
gma-u.5	100817041	uncharacterized LOC100817041
gma-u.5	100780200	uncharacterized LOC100780200
sly-u.5	101246990	uncharacterized LOC101246990
osa-u.5	4328226	uncharacterized LOC4328226
zma-u.5	100191155	uncharacterized LOC100191155
bra-r.6	103855934	uncharacterized LOC103855934
bra-r.6	103846690	uncharacterized LOC103846690
vvi-u.5	100255893	uncharacterized LOC100255893
ppo-u.5	7470705	uncharacterized LOC7470705
mtr-u.5	11414204	uncharacterized LOC11414204
tae-r.2	123132117	uncharacterized LOC123132117
tae-r.2	123136137	uncharacterized LOC123136137
tae-r.2	123143656	uncharacterized LOC123143656
hvu-r.1	123401479	uncharacterized LOC123401479
ghi-r.1	107958883	uncharacterized LOC107958883
ghi-r.1	107907001	uncharacterized LOC107907001
bna-r.1	BNAC09G44780D	uncharacterized BNAC09G44780D
bna-r.1	106419788	uncharacterized LOC106419788
bna-r.1	106430866	putative Myo28B1
sbi-r.1	8057528	uncharacterized LOC8057528
sot-r.1	102578824	uncharacterized LOC102578824
cit-r.1	102629467	hypothetical protein
bdi-r.1	100836573	uncharacterized LOC100836573
nta-r.1	107809971	uncharacterized LOC107809971
nta-r.1	107791694	uncharacterized LOC107791694

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_042924047.1 [sequence] [blastp]
XP_042924048.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, nucl 1, cyto 1, cyto_nucl 1	(predict for XP_042924047.1)
chlo 9, nucl 1, cyto 1, cyto_nucl 1	(predict for XP_042924048.1)

Subcellular
localization
TargetP

other 5, mito 3	(predict for XP_042924047.1)
other 5, mito 3	(predict for XP_042924048.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_06g285850v5	ath-u.5 for AT5G11810	gma-u.5 for 100817041	gma-u.5 for 100780200	sly-u.5 for 101246990	osa-u.5 for 4328226	zma-u.5 for 100191155	bra-r.6 for 103855934	bra-r.6 for 103846690	vvi-u.5 for 100255893	ppo-u.5 for 7470705	mtr-u.5 for 11414204	tae-r.2 for 123132117	tae-r.2 for 123136137	tae-r.2 for 123143656	hvu-r.1 for 123401479	ghi-r.1 for 107958883	ghi-r.1 for 107907001	bna-r.1 for BNAC09G44780D	bna-r.1 for 106419788	bna-r.1 for 106430866	sbi-r.1 for 8057528	sot-r.1 for 102578824	cit-r.1 for 102629467	bdi-r.1 for 100836573	nta-r.1 for 107809971	nta-r.1 for 107791694

Ortholog

Ortholog ID: 7325

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

rhomboid family protein

uncharacterized LOC100817041

uncharacterized LOC100780200

uncharacterized LOC101246990

uncharacterized LOC4328226

uncharacterized LOC100191155

uncharacterized LOC103855934

uncharacterized LOC103846690

uncharacterized LOC100255893

uncharacterized LOC7470705

uncharacterized LOC11414204

uncharacterized LOC123136137

uncharacterized LOC123166155

uncharacterized LOC123401479

uncharacterized LOC107958883

uncharacterized LOC107907001

uncharacterized BNAC09G44780D

uncharacterized LOC106419788

putative Myo28B1

uncharacterized LOC8057528

uncharacterized LOC102578824

hypothetical protein

uncharacterized LOC100836573

uncharacterized LOC107809971

uncharacterized LOC107791694

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00480	Glutathione metabolism	3
ath01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01240	Biosynthesis of cofactors	3
gma04712	Circadian rhythm - plant	3
gma00270	Cysteine and methionine metabolism	2
gma00670	One carbon pool by folate	2
gma00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	11
gma04148	Efferocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01240	Biosynthesis of cofactors	3
osa00010	Glycolysis / Gluconeogenesis	2
osa00760	Nicotinate and nicotinamide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	6
zma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00071	Fatty acid degradation	3
bra01212	Fatty acid metabolism	3
bra00010	Glycolysis / Gluconeogenesis	2
bra00030	Pentose phosphate pathway	2
bra00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	5
bra01230	Biosynthesis of amino acids	4
bra00190	Oxidative phosphorylation	4
bra00270	Cysteine and methionine metabolism	2
bra00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00010	Glycolysis / Gluconeogenesis	2
ppo00500	Starch and sucrose metabolism	2
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo01200	Carbon metabolism	2
ppo01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	4
mtr01210	2-Oxocarboxylic acid metabolism	4
mtr00020	Citrate cycle (TCA cycle)	3
mtr01230	Biosynthesis of amino acids	3
mtr00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00540	Lipopolysaccharide biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	12
ghi00270	Cysteine and methionine metabolism	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	12
ghi00270	Cysteine and methionine metabolism	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00900	Terpenoid backbone biosynthesis	2
bna00480	Glutathione metabolism	2
bna04075	Plant hormone signal transduction	2
bna00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00250	Alanine, aspartate and glutamate metabolism	2
bna00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03060	Protein export	4
bna00250	Alanine, aspartate and glutamate metabolism	2
bna00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	5
sbi00020	Citrate cycle (TCA cycle)	2
sbi00785	Lipoic acid metabolism	2
sbi01200	Carbon metabolism	2
sbi01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03050	Proteasome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00230	Purine metabolism	2
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00500	Starch and sucrose metabolism	2
bdi01200	Carbon metabolism	2
bdi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	5
nta00190	Oxidative phosphorylation	4
nta03008	Ribosome biogenesis in eukaryotes	4
nta03250	Viral life cycle - HIV-1	4
nta00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	9
nta03013	Nucleocytoplasmic transport	6
nta03008	Ribosome biogenesis in eukaryotes	4
nta03250	Viral life cycle - HIV-1	4

Expression

Expression pattern

Entrez Gene ID^*

66053786

831054

100817041

100780200

101246990

4328226

100191155

103855934

103846690

100255893

7470705

11414204

123136137

123166155

123401479

107958883

107907001

106424506

106419788

106430866

8057528

102578824

102629467

100836573

107809971

107791694

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_06g285850v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_06g285850v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	1	2	1	1	1	2	1	1	1	3	1	2	3	1	1	1	1	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_06g285850v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_06g285850v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**