Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_10g430900v5   uncharacterized protein 
 ath-u.5   AT1G20570   Spc97 / Spc98 family of spindle pole body (SBP) component 
 ath-u.5   emb1427   Spc97 / Spc98 family of spindle pole body (SBP) component 
 gma-u.5   100782299   gamma-tubulin complex component 5 
 sly-u.5   101263207   uncharacterized LOC101263207 
 osa-u.5   4329507   uncharacterized LOC4329507 
 osa-u.5   4352744   uncharacterized LOC4352744 
 zma-u.5   100193469   uncharacterized LOC100193469 
 vvi-u.5   100247210   uncharacterized LOC100247210 
 ppo-u.5   18106369   uncharacterized LOC18106369 
 mtr-u.5   11435183   gamma-tubulin complex component 5 

close


Top 50 coexpressed genes to CHLRE_10g430900v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to CHLRE_10g430900v5 (cre-r.1 coexpression data)

CoexMap"66054994"


creCHLRE_10g430900v5 | Entrez gene ID : 66054994    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 2 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007020 [list] [network] microtubule nucleation  (7 genes)  IEA  
GO:0031122 [list] [network] cytoplasmic microtubule organization  (14 genes)  IEA  
GO:0051225 [list] [network] spindle assembly  (14 genes)  IEA  
GO:0051321 [list] [network] meiotic cell cycle  (46 genes)  IEA  
GO:0000278 [list] [network] mitotic cell cycle  (160 genes)  IEA  
GO CC
GO:0008275 [list] [network] gamma-tubulin small complex  (4 genes)  IEA  
GO:0000923 [list] [network] equatorial microtubule organizing center  (5 genes)  IEA  
GO:0000922 [list] [network] spindle pole  (66 genes)  IEA  
GO:0005813 [list] [network] centrosome  (109 genes)  IEA  
GO MF
GO:0043015 [list] [network] gamma-tubulin binding  (6 genes)  IEA  
GO:0051011 [list] [network] microtubule minus-end binding  (6 genes)  IEA  
Protein XP_042920040.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  nucl 1,  pero 1,  cysk 1,  nucl_plas 1  (predict for XP_042920040.1)
Subcellular
localization
TargetP
mito 6,  other 4  (predict for XP_042920040.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_10g430900v5

.
ath-u.5
for
AT1G20570

.
ath-u.5
for
emb1427

.
gma-u.5
for
100782299

.
sly-u.5
for
101263207

.
osa-u.5
for
4329507

.
osa-u.5
for
4352744

.
zma-u.5
for
100193469

.
vvi-u.5
for
100247210

.
ppo-u.5
for
18106369

.
mtr-u.5
for
11435183

.


Ortholog ID: 9219
Species ath ath gma sly osa osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol emb1427 AT1G20570 LOC100782299 LOC101263207 LOC4329507 LOC4352744 LOC100193469 LOC103853272 LOC100247210 LOC18106369 LOC11435183 LOC123110502 LOC123102325 LOC123445523 LOC107896248 LOC107915742 LOC106398587 LOC106436777 CHLRE_10g430900v5 LOC110433081 LOC102583102 LOC102626676 LOC100828536 LOC107802509 LOC107759531
Function* Spc97 / Spc98 family of spindle pole body (SBP) component Spc97 / Spc98 family of spindle pole body (SBP) component gamma-tubulin complex component 5 uncharacterized LOC101263207 uncharacterized LOC4329507 uncharacterized LOC4352744 uncharacterized LOC100193469 gamma-tubulin complex component 5 uncharacterized LOC100247210 uncharacterized LOC18106369 gamma-tubulin complex component 5 gamma-tubulin complex component 5 gamma-tubulin complex component 5 gamma-tubulin complex component 5-like gamma-tubulin complex component 5 uncharacterized LOC107915742 gamma-tubulin complex component 5-like gamma-tubulin complex component 5 uncharacterized protein gamma-tubulin complex component 5 gamma-tubulin complex component 5-like uncharacterized LOC102626676 gamma-tubulin complex component 5 uncharacterized LOC107802509 uncharacterized LOC107759531
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03460 Fanconi anemia pathway 3
ath03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03420 Nucleotide excision repair 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03013 Nucleocytoplasmic transport 3
bra03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00310 Lysine degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 4
ghi04070 Phosphatidylinositol signaling system 4
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 5
cre03410 Base excision repair 2
cre03420 Nucleotide excision repair 2
cre03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 3
bdi03082 ATP-dependent chromatin remodeling 2
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844366 838645 100782299 101263207 4329507 4352744 100193469 103853272 100247210 18106369 11435183 123110502 123102325 123445523 107896248 107915742 106398587 106436777 66054994 110433081 102583102 102626676 100828536 107802509 107759531
The preparation time of this page was 0.1 [sec].