Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_10g465950v5   uncharacterized protein 
 ath-u.5   AT5G57370   U4/U6.U5 small nuclear ribonucleoprotein 
 gma-u.5   100791549   U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein 
 gma-u.5   100804021   U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein 
 sly-u.5   101265655   uncharacterized LOC101265655 
 osa-u.5   4329300   uncharacterized LOC4329300 
 zma-u.5   100283326   splicing factor, arginine/serine-rich 7 
 vvi-u.5   100261636   uncharacterized LOC100261636 
 ppo-u.5   7488960   uncharacterized LOC7488960 
 mtr-u.5   11443782   U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein 

close


Top 50 coexpressed genes to CHLRE_10g465950v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to CHLRE_10g465950v5 (cre-r.1 coexpression data)

CoexMap"66055192"


creCHLRE_10g465950v5 | Entrez gene ID : 66055192    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03040 [list] [network] Spliceosome (105 genes)
GO BP
GO:0008380 [list] [network] RNA splicing  (117 genes)  IEA  
GO CC
GO:0071011 [list] [network] precatalytic spliceosome  (26 genes)  IEA  
GO MF
Protein XP_042920651.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_042920651.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042920651.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_10g465950v5

.
ath-u.5
for
AT5G57370

.
gma-u.5
for
100791549

.
gma-u.5
for
100804021

.
sly-u.5
for
101265655

.
osa-u.5
for
4329300

.
zma-u.5
for
100283326

.
vvi-u.5
for
100261636

.
ppo-u.5
for
7488960

.
mtr-u.5
for
11443782

.


Ortholog ID: 7764
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G57370 LOC100804021 LOC100791549 LOC101265655 LOC4329300 LOC100283326 LOC103845179 LOC117132192 LOC100261636 LOC7488960 LOC11443782 LOC123145861 LOC123128729 LOC123401209 LOC107941638 LOC107926996 LOC106397185 LOC106389022 CHLRE_10g465950v5 LOC8061556 LOC102579511 LOC102612655 LOC100845591 LOC107775019 LOC107762655
Function* U4/U6.U5 small nuclear ribonucleoprotein U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein uncharacterized LOC101265655 uncharacterized LOC4329300 splicing factor, arginine/serine-rich 7 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein uncharacterized LOC100261636 uncharacterized LOC7488960 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like uncharacterized protein U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein uncharacterized LOC102612655 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein uncharacterized LOC107775019 uncharacterized LOC107762655
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
gma03013 Nucleocytoplasmic transport 3
gma03015 mRNA surveillance pathway 3
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo03040 Spliceosome 3
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03082 ATP-dependent chromatin remodeling 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00220 Arginine biosynthesis 3
ghi01210 2-Oxocarboxylic acid metabolism 3
ghi01230 Biosynthesis of amino acids 3
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00220 Arginine biosynthesis 3
ghi01210 2-Oxocarboxylic acid metabolism 3
ghi01230 Biosynthesis of amino acids 3
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 4
cre03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835843 100804021 100791549 101265655 4329300 100283326 103845179 117132192 100261636 7488960 11443782 123145861 123128729 123401209 107941638 107926996 106397185 106389022 66055192 8061556 102579511 102612655 100845591 107775019 107762655
The preparation time of this page was 0.1 [sec].