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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g501100v5   uncharacterized protein 
 ath-u.5   AT3G21300   RNA methyltransferase family protein 
 gma-u.5   100777466   uncharacterized RNA methyltransferase PG_1095 
 sly-u.5   101249444   uncharacterized LOC101249444 
 osa-u.5   4327311   uncharacterized LOC4327311 
 zma-u.5   100275594   uncharacterized LOC100275594 
 vvi-u.5   100261689   uncharacterized LOC100261689 
 ppo-u.5   18094804   uncharacterized LOC18094804 
 mtr-u.5   11441984   uncharacterized RNA methyltransferase PG_1095 

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Top 50 coexpressed genes to CHLRE_12g501100v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g501100v5 (cre-r.1 coexpression data)

CoexMap"66055479"


creCHLRE_12g501100v5 | Entrez gene ID : 66055479    
Species cre ath gma sly osa zma vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi sbi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006396 [list] [network] RNA processing  (507 genes)  IEA  
GO CC
GO MF
Protein XP_042918279.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_042918279.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_042918279.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g501100v5

.
ath-u.5
for
AT3G21300

.
gma-u.5
for
100777466

.
sly-u.5
for
101249444

.
osa-u.5
for
4327311

.
zma-u.5
for
100275594

.
vvi-u.5
for
100261689

.
ppo-u.5
for
18094804

.
mtr-u.5
for
11441984

.


Ortholog ID: 9500
Species ath gma sly osa zma bra vvi ppo mtr tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT3G21300 LOC100777466 LOC101249444 LOC4327311 LOC100275594 LOC103869184 LOC100261689 LOC18094804 LOC11441984 LOC123077421 LOC123442894 LOC107915671 LOC107895723 LOC125597698 LOC106446007 CHLRE_12g501100v5 LOC8084349 LOC102599993 LOC102625205 LOC100834589 LOC107787311 LOC107774326
Function* RNA methyltransferase family protein uncharacterized RNA methyltransferase PG_1095 uncharacterized LOC101249444 uncharacterized LOC4327311 uncharacterized LOC100275594 uncharacterized RNA methyltransferase BH0687 uncharacterized LOC100261689 uncharacterized LOC18094804 uncharacterized RNA methyltransferase PG_1095 uncharacterized RNA methyltransferase BH0687 uncharacterized RNA methyltransferase BH0687 uncharacterized RNA methyltransferase CT0009 uncharacterized RNA methyltransferase CT0009 uncharacterized RNA methyltransferase BH0687-like uncharacterized RNA methyltransferase BH0687-like uncharacterized protein uncharacterized RNA methyltransferase BH0687 uncharacterized RNA methyltransferase PG_1095 uncharacterized LOC102625205 uncharacterized RNA methyltransferase BH0687 uncharacterized LOC107787311 uncharacterized LOC107774326
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
gma00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00230 Purine metabolism 3
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 6
bna01240 Biosynthesis of cofactors 6
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 6
bna01240 Biosynthesis of cofactors 6
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00290 Valine, leucine and isoleucine biosynthesis 5
sot01230 Biosynthesis of amino acids 5
sot03010 Ribosome 4
sot00770 Pantothenate and CoA biosynthesis 3
sot01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta04146 Peroxisome 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta04146 Peroxisome 2
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821684 100777466 101249444 4327311 100275594 103869184 100261689 18094804 11441984 123077421 123442894 107915671 107895723 125597698 106446007 66055479 8084349 102599993 102625205 100834589 107787311 107774326
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