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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g561150v5   uncharacterized protein 
 cre-r.1   CHLRE_01g023550v5   uncharacterized protein 
 cre-r.1   CHLRE_06g258363v5   uncharacterized protein 
 ath-u.5   AT3G17920   Outer arm dynein light chain 1 protein 
 ath-u.5   AT1G48540   Outer arm dynein light chain 1 protein 
 gma-u.5   100800812   uncharacterized LOC100800812 
 gma-u.5   100788364   uncharacterized LOC100788364 
 sly-u.5   101264912   uncharacterized LOC101264912 
 osa-u.5   4332100   uncharacterized LOC4332100 
 zma-u.5   103632861   Outer arm dynein light chain 1 protein 
 bra-r.6   103871467   uncharacterized LOC103871467 
 bra-r.6   103869628   uncharacterized LOC103869628 
 vvi-u.5   100250985   uncharacterized LOC100250985 
 ppo-u.5   7486717   uncharacterized LOC7486717 
 ppo-u.5   7474833   uncharacterized LOC7474833 
 mtr-u.5   11412401   uncharacterized LOC11412401 
 tae-r.2   123085143   uncharacterized LOC123085143 
 tae-r.2   123092932   uncharacterized LOC123092932 
 tae-r.2   123098210   uncharacterized LOC123098210 
 hvu-r.1   123449283   uncharacterized LOC123449283 
 ghi-r.1   107887865   serine/threonine-protein kinase 11-interacting protein 
 ghi-r.1   107930999   uncharacterized LOC107930999 
 ghi-r.1   107944315   uncharacterized LOC107944315 
 bna-r.1   111197757   uncharacterized LOC111197757 
 bna-r.1   111207129   uncharacterized LOC111207129 
 bna-r.1   125574927   uncharacterized LOC125574927 
 sbi-r.1   8056872   uncharacterized LOC8056872 
 sot-r.1   102592520   uncharacterized LOC102592520 
 cit-r.1   102607018   hypothetical protein 
 bdi-r.1   100825962   uncharacterized LOC100825962 
 nta-r.1   107771912   uncharacterized LOC107771912 

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Top 50 coexpressed genes to CHLRE_12g561150v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g561150v5 (cre-r.1 coexpression data)

CoexMap"66055869"


creCHLRE_12g561150v5 | Entrez gene ID : 66055869    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 3 2 2 1 1 1 2 1 2 1 3 1 3 3 1 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (2907 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042918827.1 [sequence] [blastp]
XP_042918828.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 3,  cyto_nucl 3,  cyto_pero 3  (predict for XP_042918827.1)
cyto 6,  chlo 1,  nucl 1,  mito 1,  pero 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_042918828.1)
Subcellular
localization
TargetP
other 5  (predict for XP_042918827.1)
other 5  (predict for XP_042918828.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g561150v5
cre-r.1
for
CHLRE_01g023550v5
cre-r.1
for
CHLRE_06g258363v5
ath-u.5
for
AT3G17920
ath-u.5
for
AT1G48540
gma-u.5
for
100800812
gma-u.5
for
100788364
sly-u.5
for
101264912
osa-u.5
for
4332100
zma-u.5
for
103632861
bra-r.6
for
103871467
bra-r.6
for
103869628
vvi-u.5
for
100250985
ppo-u.5
for
7486717
ppo-u.5
for
7474833
mtr-u.5
for
11412401
tae-r.2
for
123085143
tae-r.2
for
123092932
tae-r.2
for
123098210
hvu-r.1
for
123449283
ghi-r.1
for
107887865
ghi-r.1
for
107930999
ghi-r.1
for
107944315
bna-r.1
for
111197757
bna-r.1
for
111207129
bna-r.1
for
125574927
sbi-r.1
for
8056872
sot-r.1
for
102592520
cit-r.1
for
102607018
bdi-r.1
for
100825962
nta-r.1
for
107771912


Ortholog ID: 6253
Species cre cre cre ath ath gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae tae hvu ghi ghi ghi bna bna bna sbi sot cit bdi nta
Symbol CHLRE_12g561150v5 CHLRE_01g023550v5 CHLRE_06g258363v5 AT3G17920 AT1G48540 LOC100800812 LOC100788364 LOC101264912 LOC4332100 LOC103632861 LOC103871467 LOC103869628 LOC100250985 LOC7486717 LOC7474833 LOC11412401 LOC123085143 LOC123092932 LOC123098210 LOC123449283 LOC107930999 LOC107944315 LOC107908488 LOC111197757 LOC125574927 LOC106360413 LOC8056872 LOC102592520 LOC102607018 LOC100825962 LOC107771912
Function* uncharacterized protein uncharacterized protein uncharacterized protein Outer arm dynein light chain 1 protein Outer arm dynein light chain 1 protein uncharacterized LOC100800812 uncharacterized LOC100788364 uncharacterized LOC101264912 uncharacterized LOC4332100 Outer arm dynein light chain 1 protein uncharacterized LOC103871467 uncharacterized LOC103869628 uncharacterized LOC100250985 uncharacterized LOC7486717 uncharacterized LOC7474833 uncharacterized LOC11412401 uncharacterized LOC123085143 uncharacterized LOC123092932 uncharacterized LOC123098210 uncharacterized LOC123449283 uncharacterized LOC107930999 uncharacterized LOC107944315 serine/threonine-protein kinase 11-interacting protein uncharacterized LOC111197757 uncharacterized LOC125574927 uncharacterized LOC106360413 uncharacterized LOC8056872 uncharacterized LOC102592520 hypothetical protein uncharacterized LOC100825962 uncharacterized LOC107771912
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04814 Motor proteins 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03420 Nucleotide excision repair 4
gma04142 Lysosome 2
gma03020 RNA polymerase 2
gma04120 Ubiquitin mediated proteolysis 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo04136 Autophagy - other 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00562 Inositol phosphate metabolism 2
mtr00100 Steroid biosynthesis 2
mtr00561 Glycerolipid metabolism 2
mtr00564 Glycerophospholipid metabolism 2
mtr00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 2
tae04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
tae04518 Integrin signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae00562 Inositol phosphate metabolism 3
tae01240 Biosynthesis of cofactors 3
tae04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 5
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 4
bna04070 Phosphatidylinositol signaling system 4
bna00564 Glycerophospholipid metabolism 3
bna00565 Ether lipid metabolism 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 4
bna04070 Phosphatidylinositol signaling system 4
bna00564 Glycerophospholipid metabolism 3
bna00565 Ether lipid metabolism 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 9
bna03250 Viral life cycle - HIV-1 9
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 3
cit04136 Autophagy - other 3
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00562 Inositol phosphate metabolism 2
bdi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66055869 5715244 5722085 819843 841275 100800812 100788364 101264912 4332100 103632861 103871467 103869628 100250985 7486717 7474833 11412401 123085143 123092932 123098210 123449283 107930999 107944315 107908488 111197757 125574927 106360413 8056872 102592520 102607018 100825962 107771912
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