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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_14g629400v5   uncharacterized protein 
 ath-u.5   AT5G62760   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 gma-u.5   100804293   uncharacterized LOC100804293 
 gma-u.5   100775851   protein PAF1 homolog 
 sly-u.5   101256497   uncharacterized LOC101256497 
 osa-u.5   4328718   uncharacterized LOC4328718 
 zma-u.5   100276773   uncharacterized LOC100276773 
 vvi-u.5   100265726   uncharacterized LOC100265726 
 ppo-u.5   18105814   uncharacterized LOC18105814 
 mtr-u.5   11445374   YLP motif-containing protein 1 

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Top 50 coexpressed genes to CHLRE_14g629400v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_14g629400v5 (cre-r.1 coexpression data)

CoexMap"66056312"


creCHLRE_14g629400v5 | Entrez gene ID : 66056312    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032204 [list] [network] regulation of telomere maintenance  (4 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
Protein XP_042917025.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_042917025.1)
Subcellular
localization
TargetP
other 7,  mito 4  (predict for XP_042917025.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_14g629400v5

.
ath-u.5
for
AT5G62760

.
gma-u.5
for
100804293

.
gma-u.5
for
100775851

.
sly-u.5
for
101256497

.
osa-u.5
for
4328718

.
zma-u.5
for
100276773

.
vvi-u.5
for
100265726

.
ppo-u.5
for
18105814

.
mtr-u.5
for
11445374

.


Ortholog ID: 11012
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G62760 LOC100775851 LOC100804293 LOC101256497 LOC4328718 LOC100276773 LOC103874715 LOC100265726 LOC18105814 LOC11445374 LOC123127308 LOC123144376 LOC123403840 LOC107946497 LOC106424904 LOC106347851 CHLRE_14g629400v5 LOC8082951 LOC102590443 LOC102629941 LOC100838487 LOC107794033 LOC107775130
Function* P-loop containing nucleoside triphosphate hydrolases superfamily protein protein PAF1 homolog uncharacterized LOC100804293 uncharacterized LOC101256497 uncharacterized LOC4328718 uncharacterized LOC100276773 YLP motif-containing protein 1 uncharacterized LOC100265726 uncharacterized LOC18105814 YLP motif-containing protein 1 uncharacterized LOC123127308 uncharacterized LOC123144376 uncharacterized LOC123403840 uncharacterized LOC107946497 uncharacterized LOC106424904 YLP motif-containing protein 1-like uncharacterized protein uncharacterized LOC8082951 uncharacterized LOC102590443 uncharacterized LOC102629941 uncharacterized LOC100838487 uncharacterized LOC107794033 uncharacterized LOC107775130
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae03040 Spliceosome 5
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 8
tae03013 Nucleocytoplasmic transport 4
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836397 100775851 100804293 101256497 4328718 100276773 103874715 100265726 18105814 11445374 123127308 123144376 123403840 107946497 106424904 106347851 66056312 8082951 102590443 102629941 100838487 107794033 107775130
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