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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   F3H   flavanone 3-hydroxylase 
 gma-r.7   F3H   flavanone 3-hydroxylase 
 gma-m.5   F3H   flavanone 3-hydroxylase 
 gma-u.5   100780057   naringenin,2-oxoglutarate 3-dioxygenase 
 gma-u.5   100799462   naringenin,2-oxoglutarate 3-dioxygenase 
 mtr-u.5   11408162   naringenin,2-oxoglutarate 3-dioxygenase 
 mtr-u.5   11443565   naringenin,2-oxoglutarate 3-dioxygenase 
 mtr-u.5   25489119   naringenin,2-oxoglutarate 3-dioxygenase 
 ppo-u.5   18099194   naringenin,2-oxoglutarate 3-dioxygenase 
 ppo-u.5   18099191   naringenin,2-oxoglutarate 3-dioxygenase 
 vvi-u.5   100253950   flavanone 3-dioxygenase-like 
 vvi-u.5   F3H   flavanone 3-hydroxylase 
 vvi-u.5   104879126   naringenin,2-oxoglutarate 3-dioxygenase 
 sly-u.5   F3H   flavanone 3-dioxygenase 
 osa-u.5   9270463   flavanone 3-dioxygenase 1-like 
 zma-u.5   542712   uncharacterized LOC542712 

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Top 50 coexpressed genes to F3H (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to F3H (gma-u.5 coexpression data)

CoexMap"732548"


gmaF3H | Entrez gene ID : 732548      
Species gma mtr ppo vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae ath bna ghi
Paralog 5 3 2 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00941 [list] [network] Flavonoid biosynthesis (104 genes)
GO BP
GO CC
GO MF
Protein NP_001236797.1 [sequence] [blastp]
XP_040862589.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  chlo 1,  mito 1,  plas 1,  cysk 1,  chlo_mito 1,  cysk_plas 1,  mito_plas 1  (predict for NP_001236797.1)
cyto 6,  chlo 1,  nucl 1,  mito 1,  plas 1,  cysk 1,  chlo_mito 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1,  mito_plas 1  (predict for XP_040862589.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001236797.1)
other 8  (predict for XP_040862589.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
F3H

.
gma-r.7
for
F3H

.
gma-m.5
for
F3H

.
gma-u.5
for
100780057

.
gma-u.5
for
100799462

.
mtr-u.5
for
11408162

.
mtr-u.5
for
11443565

.
mtr-u.5
for
25489119

.
ppo-u.5
for
18099194

.
ppo-u.5
for
18099191

.
vvi-u.5
for
100253950

.
vvi-u.5
for
F3H

.
vvi-u.5
for
104879126

.
sly-u.5
for
F3H

.
osa-u.5
for
9270463

.
zma-u.5
for
542712

.


Ortholog ID: 4929
Species gma sly osa zma bra vvi vvi ppo ppo mtr mtr tae tae ghi ghi bna sot cit nta nta
Symbol LOC100780057 F3H LOC9270463 LOC542712 LOC103841041 LOC104879126 F3H LOC18099191 LOC18099194 LOC11408162 LOC11443565 LOC123042899 LOC123186261 LOC107912992 LOC121202986 LOC111197703 F3H LOC102617426 F3H LOC107806462
Function* naringenin,2-oxoglutarate 3-dioxygenase flavanone 3-dioxygenase flavanone 3-dioxygenase 1-like uncharacterized LOC542712 naringenin,2-oxoglutarate 3-dioxygenase naringenin,2-oxoglutarate 3-dioxygenase flavanone 3-hydroxylase naringenin,2-oxoglutarate 3-dioxygenase naringenin,2-oxoglutarate 3-dioxygenase naringenin,2-oxoglutarate 3-dioxygenase naringenin,2-oxoglutarate 3-dioxygenase naringenin,2-oxoglutarate 3-dioxygenase naringenin,2-oxoglutarate 3-dioxygenase naringenin,2-oxoglutarate 3-dioxygenase naringenin,2-oxoglutarate 3-dioxygenase naringenin,2-oxoglutarate 3-dioxygenase flavanone 3 beta-hydroxylase naringenin,2-oxoglutarate 3-dioxygenase-like flavanone 3-hydroxylase flavanone 3-hydroxylase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 5
gma00944 Flavone and flavonol biosynthesis 2
gma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00941 Flavonoid biosynthesis 7
sly00944 Flavone and flavonol biosynthesis 2
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa02010 ABC transporters 2
osa00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00941 Flavonoid biosynthesis 7
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00941 Flavonoid biosynthesis 8
bra00940 Phenylpropanoid biosynthesis 3
bra04712 Circadian rhythm - plant 3
bra01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00941 Flavonoid biosynthesis 11
vvi04712 Circadian rhythm - plant 3
vvi00940 Phenylpropanoid biosynthesis 3
vvi00944 Flavone and flavonol biosynthesis 2
vvi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00941 Flavonoid biosynthesis 9
ppo00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00941 Flavonoid biosynthesis 13
ppo04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 6
mtr00941 Flavonoid biosynthesis 3
mtr00280 Valine, leucine and isoleucine degradation 2
mtr00650 Butanoate metabolism 2
mtr00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 6
mtr00941 Flavonoid biosynthesis 3
mtr00280 Valine, leucine and isoleucine degradation 2
mtr00650 Butanoate metabolism 2
mtr00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 4
tae00053 Ascorbate and aldarate metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00941 Flavonoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 10
ghi00940 Phenylpropanoid biosynthesis 4
ghi04712 Circadian rhythm - plant 2
ghi00944 Flavone and flavonol biosynthesis 2
ghi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 10
ghi00940 Phenylpropanoid biosynthesis 4
ghi04712 Circadian rhythm - plant 2
ghi00944 Flavone and flavonol biosynthesis 2
ghi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00941 Flavonoid biosynthesis 13
bna04712 Circadian rhythm - plant 8
bna00071 Fatty acid degradation 2
bna00280 Valine, leucine and isoleucine degradation 2
bna00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00941 Flavonoid biosynthesis 8
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00941 Flavonoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00941 Flavonoid biosynthesis 8
nta00942 Anthocyanin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00941 Flavonoid biosynthesis 10
nta00942 Anthocyanin biosynthesis 2
nta04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100780057 100736482 9270463 542712 103841041 104879126 100233079 18099191 18099194 11408162 11443565 123042899 123186261 107912992 121202986 111197703 102577463 102617426 107770893 107806462
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