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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   732836   probable ion channel CASTOR 
 zma-r.6   732836   probable ion channel CASTOR 
 zma-m.5   732836   probable ion channel CASTOR 
 zma-u.5   732770   probable ion channel POLLUX 
 sbi-r.1   8062390   probable ion channel POLLUX 
 sbi-r.1   8080164   probable ion channel CASTOR 
 osa-u.5   4324936   probable ion channel POLLUX 
 osa-u.5   4334751   probable ion channel CASTOR 
 tae-r.2   123062744   probable ion channel POLLUX 
 tae-r.2   123071565   probable ion channel POLLUX 
 tae-r.2   123123756   probable ion channel CASTOR 
 hvu-r.1   123395046   probable ion channel CASTOR 
 hvu-r.1   123441991   probable ion channel POLLUX 
 bdi-r.1   100829275   probable ion channel POLLUX 
 bdi-r.1   100824882   probable ion channel CASTOR 
 ath-u.5   AT5G49960   ion channel protein 
 gma-u.5   732613   ion channel CASTOR 
 gma-u.5   732614   probable ion channel SYM8 
 gma-u.5   100802316   probable ion channel SYM8 
 sly-u.5   101257908   probable ion channel POLLUX 
 bra-r.6   103852199   probable ion channel POLLUX 
 vvi-u.5   100250955   ion channel DMI1 
 vvi-u.5   100254139   ion channel CASTOR 
 ppo-u.5   18104601   ion channel CASTOR 
 ppo-u.5   18098313   ion channel DMI1 
 ppo-u.5   7498107   ion channel CASTOR 
 mtr-u.5   11433851   ion channel DMI1 
 mtr-u.5   25499758   ion channel CASTOR 
 ghi-r.1   107903353   ion channel CASTOR 
 ghi-r.1   107927503   ion channel CASTOR 
 ghi-r.1   107938524   ion channel DMI1 
 bna-r.1   106347006   probable ion channel POLLUX 
 bna-r.1   106402803   probable ion channel POLLUX 
 sot-r.1   102590579   ion channel DMI1-like 
 sot-r.1   102605921   ion channel CASTOR-like 
 cit-r.1   102611746   ion channel DMI1 
 cit-r.1   102624100   ion channel CASTOR-like 
 nta-r.1   107778701   ion channel CASTOR 
 nta-r.1   107799596   putative ion channel SYM8 
 nta-r.1   107813321   putative ion channel POLLUX 
 cre-r.1   CHLRE_11g479350v5   uncharacterized protein 
 cre-r.1   CHLRE_14g615800v5   uncharacterized protein 
 cre-r.1   CHLRE_16g682600v5   uncharacterized protein 

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Top 50 coexpressed genes to 732836 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 732836 (zma-u.5 coexpression data)

CoexMap"732836"


zmaLOC732836 | Entrez gene ID : 732836      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 2 2 3 2 2 1 3 1 1 2 3 2 3 2 2 2 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006811 [list] [network] monoatomic ion transport  (435 genes)  IEA  
GO CC
GO MF
Protein XP_008644339.1 [sequence] [blastp]
XP_008644340.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 7,  vacu 1,  mito 1,  E.R. 1  (predict for XP_008644339.1)
plas 7,  vacu 2  (predict for XP_008644340.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_008644339.1)
chlo 9  (predict for XP_008644340.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
732836
zma-r.6
for
732836
zma-m.5
for
732836
zma-u.5
for
732770
sbi-r.1
for
8062390
sbi-r.1
for
8080164
osa-u.5
for
4324936
osa-u.5
for
4334751
tae-r.2
for
123062744
tae-r.2
for
123071565
tae-r.2
for
123123756
hvu-r.1
for
123395046
hvu-r.1
for
123441991
bdi-r.1
for
100829275
bdi-r.1
for
100824882
ath-u.5
for
AT5G49960
gma-u.5
for
732613
gma-u.5
for
732614
gma-u.5
for
100802316
sly-u.5
for
101257908
bra-r.6
for
103852199
vvi-u.5
for
100250955
vvi-u.5
for
100254139
ppo-u.5
for
18104601
ppo-u.5
for
18098313
ppo-u.5
for
7498107
mtr-u.5
for
11433851
mtr-u.5
for
25499758
ghi-r.1
for
107903353
ghi-r.1
for
107927503
ghi-r.1
for
107938524
bna-r.1
for
106347006
bna-r.1
for
106402803
sot-r.1
for
102590579
sot-r.1
for
102605921
cit-r.1
for
102611746
cit-r.1
for
102624100
nta-r.1
for
107778701
nta-r.1
for
107799596
nta-r.1
for
107813321
cre-r.1
for
CHLRE_11g479350v5
cre-r.1
for
CHLRE_14g615800v5
cre-r.1
for
CHLRE_16g682600v5


Ortholog ID: 3507
Species zma zma sbi sbi osa osa tae tae tae hvu hvu bdi bdi ath gma gma gma sly bra vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna sot sot cit cit nta nta nta cre cre cre
Symbol LOC732836 LOC732770 LOC8062390 LOC8080164 LOC4324936 LOC4334751 LOC123123756 LOC123087666 LOC123114277 LOC123395046 LOC123441991 LOC100829275 LOC100824882 AT5G49960 LOC732613 LOC732614 LOC100802316 LOC101257908 LOC103852199 LOC100250955 LOC100254139 LOC18104601 LOC18098313 LOC7498107 LOC11433851 LOC25499758 LOC107903353 LOC107927503 LOC107908564 LOC106347006 LOC106402803 LOC102590579 LOC102605921 LOC102611746 LOC102624100 LOC107778701 LOC107799596 LOC107813321 CHLRE_16g682600v5 CHLRE_10g455350v5 CHLRE_03g149450v5
Function* probable ion channel CASTOR probable ion channel POLLUX probable ion channel POLLUX probable ion channel CASTOR probable ion channel POLLUX probable ion channel CASTOR probable ion channel CASTOR probable ion channel CASTOR probable ion channel CASTOR probable ion channel CASTOR probable ion channel POLLUX probable ion channel POLLUX probable ion channel CASTOR ion channel protein ion channel CASTOR probable ion channel SYM8 probable ion channel SYM8 probable ion channel POLLUX probable ion channel POLLUX ion channel DMI1 ion channel CASTOR ion channel CASTOR ion channel DMI1 ion channel CASTOR ion channel DMI1 ion channel CASTOR ion channel CASTOR ion channel CASTOR ion channel DMI1 probable ion channel POLLUX probable ion channel POLLUX ion channel DMI1-like ion channel CASTOR-like ion channel DMI1 ion channel CASTOR-like ion channel CASTOR putative ion channel SYM8 putative ion channel POLLUX uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00510 N-Glycan biosynthesis 2
sbi00513 Various types of N-glycan biosynthesis 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 6
tae03013 Nucleocytoplasmic transport 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00562 Inositol phosphate metabolism 2
hvu04070 Phosphatidylinositol signaling system 2
hvu04145 Phagosome 2
hvu00561 Glycerolipid metabolism 2
hvu00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00790 Folate biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo04142 Lysosome 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 3
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 4
nta00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 732836 732770 8062390 8080164 4324936 4334751 123123756 123087666 123114277 123395046 123441991 100829275 100824882 835060 732613 732614 100802316 101257908 103852199 100250955 100254139 18104601 18098313 7498107 11433851 25499758 107903353 107927503 107908564 106347006 106402803 102590579 102605921 102611746 102624100 107778701 107799596 107813321 5717583 5723917 5721168
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