ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7454325	probable galacturonosyltransferase 6
ppo-r.4	7454325	probable galacturonosyltransferase 6
ppo-m.4	7454325	probable galacturonosyltransferase 6
gma-u.5	100819255	probable galacturonosyltransferase 6
gma-u.5	100819088	probable galacturonosyltransferase 6
gma-u.5	100811619	probable galacturonosyltransferase 6
mtr-u.5	25484343	probable galacturonosyltransferase 6
mtr-u.5	25499203	probable galacturonosyltransferase 6
ath-u.5	LGT5	los glycosyltransferase 5
ath-u.5	GAUT6	galacturonosyltransferase 6
vvi-u.5	100251205	probable galacturonosyltransferase 6
sly-u.5	101261832	probable galacturonosyltransferase 6
sly-u.5	101245133	probable galacturonosyltransferase 6
osa-u.5	4350824	probable galacturonosyltransferase 4
zma-u.5	103648136	probable galacturonosyltransferase 4

Annotation

functional annotation

KEGG

pop00520 [list] [network] Amino sugar and nucleotide sugar metabolism (156 genes)

GO BP

GO CC

GO MF

GO:0047262 [list] [network] polygalacturonate 4-alpha-galacturonosyltransferase activity

(21 genes)

IEA

Protein

XP_002307628.1 [sequence] [blastp]
XP_024458109.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 5, chlo 3, mito_plas 3	(predict for XP_002307628.1)
mito 5, chlo 3, mito_plas 3	(predict for XP_024458109.1)

Subcellular
localization
TargetP

scret 8, mito 6	(predict for XP_002307628.1)
scret 8, mito 6	(predict for XP_024458109.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7454325	ppo-r.4 for 7454325	ppo-m.4 for 7454325	gma-u.5 for 100819255	gma-u.5 for 100819088	gma-u.5 for 100811619	mtr-u.5 for 25484343	mtr-u.5 for 25499203	ath-u.5 for LGT5	ath-u.5 for GAUT6	vvi-u.5 for 100251205	sly-u.5 for 101261832	sly-u.5 for 101245133	osa-u.5 for 4350824	zma-u.5 for 103648136

Ortholog

Ortholog ID: 4199

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

sbi

bdi

Symbol

GAUT6

LGT5

Function^*

probable galacturonosyltransferase 6

galacturonosyltransferase 6

los glycosyltransferase 5

probable galacturonosyltransferase 6

probable galacturonosyltransferase 5

probable galacturonosyltransferase 6

putative galacturonosyltransferase 6

probable galacturonosyltransferase 4

probable galacturonosyltransferase 6

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	2
mtr00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00520	Amino sugar and nucleotide sugar metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00520	Amino sugar and nucleotide sugar metabolism	3
bra03015	mRNA surveillance pathway	2
bra00010	Glycolysis / Gluconeogenesis	2
bra00051	Fructose and mannose metabolism	2
bra00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	2
vvi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
ghi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	8
bna00514	Other types of O-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03022	Basal transcription factors	3
sly00020	Citrate cycle (TCA cycle)	2
sly01200	Carbon metabolism	2
sly01210	2-Oxocarboxylic acid metabolism	2
sly01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00010	Glycolysis / Gluconeogenesis	2
sly01200	Carbon metabolism	2
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta04075	Plant hormone signal transduction	2
nta00010	Glycolysis / Gluconeogenesis	2
nta00030	Pentose phosphate pathway	2
nta00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04626	Plant-pathogen interaction	3
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	2
sbi00270	Cysteine and methionine metabolism	2
sbi00020	Citrate cycle (TCA cycle)	2
sbi01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

7454325

100819255

100811619

25484343

25499203

837189

817607

103843495

103844008

100251205

107924229

107955463

106420233

106426384

102629185

101261832

101245133

102594635

102590427

107823417

107814549

4350824

103648136

8062683

100828117

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7454325 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7454325 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	3	2	2	1	2	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7454325 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7454325 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**