ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7454379	uncharacterized LOC7454379
ppo-r.4	7454379	uncharacterized LOC7454379
ppo-m.4	7454379	uncharacterized LOC7454379
ppo-u.5	7479722	uncharacterized LOC7479722
ppo-u.5	7470008	uncharacterized LOC7470008
ppo-u.5	7464011	uncharacterized LOC7464011
gma-u.5	100778123	uncharacterized LOC100778123
gma-u.5	100790241	uncharacterized LOC100790241
gma-u.5	100793040	uncharacterized LOC100793040
mtr-u.5	11415342	uncharacterized LOC11415342
mtr-u.5	11444076	uncharacterized LOC11444076
mtr-u.5	25490222	uncharacterized LOC25490222
ath-u.5	AT2G21500	RING/U-box superfamily protein
ath-u.5	AT4G39140	RING/U-box superfamily protein
ath-u.5	AT1G19680	RING/U-box superfamily protein
bra-r.6	103831993	uncharacterized LOC103831993
bra-r.6	117131777	uncharacterized LOC117131777
vvi-u.5	100250419	uncharacterized LOC100250419
vvi-u.5	100242078	uncharacterized LOC100242078
ghi-r.1	107905460	uncharacterized LOC107905460
ghi-r.1	107910203	uncharacterized LOC107910203
ghi-r.1	107913550	uncharacterized LOC107913550
bna-r.1	125575016	uncharacterized LOC125575016
bna-r.1	106438887	uncharacterized LOC106438887
bna-r.1	106349501	uncharacterized LOC106349501
cit-r.1	102615842	uncharacterized LOC102615842
cit-r.1	102624863	uncharacterized LOC102624863
sly-u.5	101260184	uncharacterized LOC101260184
sly-u.5	101253631	uncharacterized LOC101253631
sot-r.1	102579695	uncharacterized LOC102579695
sot-r.1	102595396	uncharacterized LOC102595396
nta-r.1	107765196	uncharacterized LOC107765196
nta-r.1	107783233	uncharacterized LOC107783233
nta-r.1	107785092	uncharacterized LOC107785092
osa-u.5	4325119	uncharacterized LOC4325119
zma-u.5	100382007	putative RING zinc finger domain superfamily protein
zma-u.5	100274198	uncharacterized LOC100274198
tae-r.2	123069597	uncharacterized LOC123069597
tae-r.2	123060991	uncharacterized LOC123060991
tae-r.2	123078084	uncharacterized LOC123078084
hvu-r.1	123443432	uncharacterized LOC123443432
sbi-r.1	8085815	uncharacterized LOC8085815
sbi-r.1	8085816	uncharacterized LOC8085816
bdi-r.1	100834598	uncharacterized LOC100834598
bdi-r.1	100836754	uncharacterized LOC100836754

Top 50 coexpressed genes to 7454379 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7454379 (ppo-u.5 coexpression data)

CoexMap"7454379"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_024457877.1 [sequence] [blastp]
XP_024457878.1 [sequence] [blastp]
XP_052308710.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10	(predict for XP_024457877.1)
nucl 10	(predict for XP_024457878.1)
nucl 10	(predict for XP_052308710.1)

Subcellular
localization
TargetP

chlo 6, other 4	(predict for XP_024457877.1)
chlo 6, other 4	(predict for XP_024457878.1)
chlo 6, other 4	(predict for XP_052308710.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7454379	ppo-r.4 for 7454379	ppo-m.4 for 7454379	ppo-u.5 for 7479722	ppo-u.5 for 7470008	ppo-u.5 for 7464011	gma-u.5 for 100778123	gma-u.5 for 100790241	gma-u.5 for 100793040	mtr-u.5 for 11415342	mtr-u.5 for 11444076	mtr-u.5 for 25490222	ath-u.5 for AT2G21500	ath-u.5 for AT4G39140	ath-u.5 for AT1G19680	bra-r.6 for 103831993	bra-r.6 for 117131777	vvi-u.5 for 100250419	vvi-u.5 for 100242078	ghi-r.1 for 107905460	ghi-r.1 for 107910203	ghi-r.1 for 107913550	bna-r.1 for 125575016	bna-r.1 for 106438887	bna-r.1 for 106349501	cit-r.1 for 102615842	cit-r.1 for 102624863	sly-u.5 for 101260184	sly-u.5 for 101253631	sot-r.1 for 102579695	sot-r.1 for 102595396	nta-r.1 for 107765196	nta-r.1 for 107783233	nta-r.1 for 107785092	osa-u.5 for 4325119	zma-u.5 for 100382007	zma-u.5 for 100274198	tae-r.2 for 123069597	tae-r.2 for 123060991	tae-r.2 for 123078084	hvu-r.1 for 123443432	sbi-r.1 for 8085815	sbi-r.1 for 8085816	bdi-r.1 for 100834598	bdi-r.1 for 100836754

Ortholog

Ortholog ID: 1728

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC7454379

uncharacterized LOC7479722

uncharacterized LOC7464011

uncharacterized LOC100778123

uncharacterized LOC100795191

uncharacterized LOC100808476

uncharacterized LOC11415342

uncharacterized LOC11444076

uncharacterized LOC25490222

RING/U-box superfamily protein

uncharacterized LOC117131777

uncharacterized LOC103828063

uncharacterized LOC103835140

uncharacterized LOC100250419

uncharacterized LOC100242078

uncharacterized LOC107910203

uncharacterized LOC107920176

uncharacterized LOC107945022

uncharacterized BNAANNG09230D

uncharacterized LOC106365977

uncharacterized LOC106406409

uncharacterized LOC102615842

uncharacterized LOC102624863

uncharacterized LOC101260184

uncharacterized LOC101253631

uncharacterized LOC102579695

uncharacterized LOC102595396

uncharacterized LOC107783233

uncharacterized LOC107785092

uncharacterized LOC107801689

uncharacterized LOC4325119

putative RING zinc finger domain superfamily protein

uncharacterized LOC100274198

uncharacterized LOC123069597

uncharacterized LOC123069598

uncharacterized LOC123060993

uncharacterized LOC123443432

uncharacterized LOC8085815

uncharacterized LOC8085816

uncharacterized LOC100834598

uncharacterized LOC100836754

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03022	Basal transcription factors	2
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01240	Biosynthesis of cofactors	2
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03015	mRNA surveillance pathway	2
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	10
ghi03420	Nucleotide excision repair	5
ghi03430	Mismatch repair	5
ghi03410	Base excision repair	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00230	Purine metabolism	2
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	3
sot04075	Plant hormone signal transduction	3
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04130	SNARE interactions in vesicular transport	2
nta00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00860	Porphyrin metabolism	5
nta00230	Purine metabolism	2
nta00740	Riboflavin metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	6
tae03250	Viral life cycle - HIV-1	3
tae03272	Virion - Hepatitis viruses	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00740	Riboflavin metabolism	2
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00440	Phosphonate and phosphinate metabolism	2
bdi00564	Glycerophospholipid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

7454379

7479722

7464011

100778123

100795191

100808476

11415342

11444076

25490222

816689

830069

843876

117131777

103828063

103835140

100250419

100242078

107910203

107920176

107945022

106354499

106365977

106406409

102615842

102624863

101260184

101253631

102579695

102595396

107783233

107785092

107801689

4325119

100382007

100274198

123069597

123069598

123060993

123443432

8085815

8085816

100834598

100836754

The preparation time of this page was 0.2 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	6	3	3	3	2	2	3	3	2	2	2	3	1	2	3	1	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7454379 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7454379 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**