Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7454502   single-strand DNA endonuclease 1 
 ppo-r.4   7454502   single-strand DNA endonuclease 1 
 ppo-m.4   7454502   single-strand DNA endonuclease 1 
 gma-u.5   100806919   single-strand DNA endonuclease 1 
 mtr-u.5   11439238   single-strand DNA endonuclease 1 
 ath-u.5   AT3G48900   single-stranded DNA endonuclease family protein 
 vvi-u.5   100256642   single-strand DNA endonuclease 1 
 sly-u.5   101248457   single-strand DNA endonuclease 1 
 osa-u.5   4344420   flap endonuclease GEN-like 2 
 zma-u.5   100282987   XPG I-region family protein 

close


Top 50 coexpressed genes to 7454502 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 7454502 (ppo-u.5 coexpression data)

CoexMap"7454502"


ppoLOC7454502 | Entrez gene ID : 7454502    
Species ppo gma mtr ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0017108 [list] [network] 5'-flap endonuclease activity  (14 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2205 genes)  IEA  
Protein XP_024442727.2 [sequence] [blastp]
XP_024442728.2 [sequence] [blastp]
XP_024442729.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 3,  vacu 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_024442727.2)
nucl 4,  cyto 3,  vacu 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_024442728.2)
nucl 4,  cyto 4,  mito 1,  plas 1,  cysk 1,  cysk_plas 1,  mito_plas 1  (predict for XP_024442729.2)
Subcellular
localization
TargetP
other 8  (predict for XP_024442727.2)
other 8  (predict for XP_024442728.2)
scret 5,  other 5  (predict for XP_024442729.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7454502

.
ppo-r.4
for
7454502

.
ppo-m.4
for
7454502

.
gma-u.5
for
100806919

.
mtr-u.5
for
11439238

.
ath-u.5
for
AT3G48900

.
vvi-u.5
for
100256642

.
sly-u.5
for
101248457

.
osa-u.5
for
4344420

.
zma-u.5
for
100282987

.


Ortholog ID: 11336
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi bna bna sbi sot cit bdi nta nta
Symbol AT3G48900 LOC100806919 LOC101248457 LOC4344420 LOC100282987 LOC103874916 LOC100256642 LOC7454502 LOC11439238 LOC123160162 LOC123164300 LOC123411028 LOC107892072 LOC106447881 LOC125580975 LOC8064314 LOC102598638 LOC102631209 LOC100836158 LOC107785640 LOC107762127
Function* single-stranded DNA endonuclease family protein single-strand DNA endonuclease 1 single-strand DNA endonuclease 1 flap endonuclease GEN-like 2 XPG I-region family protein flap endonuclease GEN-like 2 single-strand DNA endonuclease 1 single-strand DNA endonuclease 1 single-strand DNA endonuclease 1 single-strand DNA endonuclease 1 single-strand DNA endonuclease 1 single-strand DNA endonuclease 1 single-strand DNA endonuclease 1 single-strand DNA endonuclease 1 single-strand DNA endonuclease 1-like flap endonuclease GEN-like 2 flap endonuclease GEN-like 2 single-strand DNA endonuclease 1 flap endonuclease GEN-like 2 single-strand DNA endonuclease 1 single-strand DNA endonuclease 1
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 5
vvi03040 Spliceosome 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 5
tae03460 Fanconi anemia pathway 3
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04814 Motor proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03450 Non-homologous end-joining 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824051 100806919 101248457 4344420 100282987 103874916 100256642 7454502 11439238 123160162 123164300 123411028 107892072 106447881 125580975 8064314 102598638 102631209 100836158 107785640 107762127
The preparation time of this page was 0.1 [sec].