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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7454512   pentatricopeptide repeat-containing protein At1g55630 
 ppo-r.4   7454512   pentatricopeptide repeat-containing protein At1g55630 
 ppo-m.4   7454512   pentatricopeptide repeat-containing protein At1g55630 
 gma-u.5   100805547   pentatricopeptide repeat-containing protein At3g60050 
 gma-u.5   100792512   pentatricopeptide repeat-containing protein At3g60050 
 mtr-u.5   25496345   pentatricopeptide repeat-containing protein At3g60050 
 mtr-u.5   25485065   pentatricopeptide repeat-containing protein At1g55630 
 ath-u.5   AT3G60050   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   AT1G55630   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100255723   pentatricopeptide repeat-containing protein At1g55630 
 sly-u.5   101255741   pentatricopeptide repeat-containing protein At3g60050-like 
 osa-u.5   4349063   pentatricopeptide repeat-containing protein At3g60050 
 zma-u.5   100273731   Pentatricopeptide repeat-containing protein 

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Top 50 coexpressed genes to 7454512 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7454512 (ppo-u.5 coexpression data)

CoexMap"7454512"


ppoLOC7454512 | Entrez gene ID : 7454512    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024442492.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  mito 3  (predict for XP_024442492.1)
Subcellular
localization
TargetP
scret 4,  mito 4  (predict for XP_024442492.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7454512

.
ppo-r.4
for
7454512

.
ppo-m.4
for
7454512

.
gma-u.5
for
100805547

.
gma-u.5
for
100792512

.
mtr-u.5
for
25496345

.
mtr-u.5
for
25485065

.
ath-u.5
for
AT3G60050

.
ath-u.5
for
AT1G55630

.
vvi-u.5
for
100255723

.
sly-u.5
for
101255741

.
osa-u.5
for
4349063

.
zma-u.5
for
100273731

.


Ortholog ID: 8065
Species ath ath gma gma sly osa zma bra bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G55630 AT3G60050 LOC100805547 LOC100792512 LOC101255741 LOC4349063 LOC100273731 LOC103871030 LOC103862916 LOC100255723 LOC7454512 LOC25485065 LOC25496345 LOC123048206 LOC123181188 LOC123433805 LOC107943475 LOC107936904 LOC106345778 LOC106445117 LOC8067072 LOC102596322 LOC102609350 LOC100830027 LOC107813020 LOC107788224
Function* Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g60050 pentatricopeptide repeat-containing protein At3g60050 pentatricopeptide repeat-containing protein At3g60050-like pentatricopeptide repeat-containing protein At3g60050 Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g55630 pentatricopeptide repeat-containing protein At3g60050 pentatricopeptide repeat-containing protein At1g55630 pentatricopeptide repeat-containing protein At1g55630 pentatricopeptide repeat-containing protein At1g55630 pentatricopeptide repeat-containing protein At3g60050 pentatricopeptide repeat-containing protein At3g60050 pentatricopeptide repeat-containing protein At1g55630 pentatricopeptide repeat-containing protein At3g60050-like pentatricopeptide repeat-containing protein At3g60050 pentatricopeptide repeat-containing protein At3g60050 pentatricopeptide repeat-containing protein At1g55630 pentatricopeptide repeat-containing protein At3g60050 pentatricopeptide repeat-containing protein At3g60050 pentatricopeptide repeat-containing protein At3g60050-like pentatricopeptide repeat-containing protein At1g55630-like pentatricopeptide repeat-containing protein At3g60050 pentatricopeptide repeat-containing protein At1g55630-like pentatricopeptide repeat-containing protein At1g55630
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu03008 Ribosome biogenesis in eukaryotes 4
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842012 825175 100805547 100792512 101255741 4349063 100273731 103871030 103862916 100255723 7454512 25485065 25496345 123048206 123181188 123433805 107943475 107936904 106345778 106445117 8067072 102596322 102609350 100830027 107813020 107788224
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