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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7456676   superoxide dismutase [Fe], chloroplastic 
 ppo-r.4   7456676   superoxide dismutase [Fe], chloroplastic 
 ppo-m.4   7456676   superoxide dismutase [Fe], chloroplastic 
 ppo-u.5   18103839   superoxide dismutase [Fe], chloroplastic 
 gma-u.5   SODB2   iron-superoxide dismutase 
 gma-u.5   SODB   Fe-superoxide dismutase 
 gma-u.5   100814802   superoxide dismutase [Fe], chloroplastic 
 mtr-u.5   25483199   superoxide dismutase [Fe], chloroplastic 
 ath-u.5   FSD1   Fe superoxide dismutase 1 
 ath-u.5   FSD2   Fe superoxide dismutase 2 
 vvi-u.5   100258067   superoxide dismutase [Fe], chloroplastic 
 sly-u.5   FESOD   iron superoxide dismutase 
 sly-u.5   101248277   superoxide dismutase [Fe], chloroplastic 
 osa-u.5   4339922   superoxide dismutase [Fe] 1, chloroplastic-like 
 zma-u.5   100274012   superoxide dismutase 

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Top 50 coexpressed genes to 7456676 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7456676 (ppo-u.5 coexpression data)

CoexMap"7456676"


ppoLOC7456676 | Entrez gene ID : 7456676    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 3 1 2 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop04146 [list] [network] Peroxisome (120 genes)
GO BP
GO:0006801 [list] [network] superoxide metabolic process  (17 genes)  IEA  
GO CC
GO:0042644 [list] [network] chloroplast nucleoid  (7 genes)  IEA  
GO MF
GO:0004784 [list] [network] superoxide dismutase activity  (13 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (2135 genes)  IEA  
Protein XP_002322315.3 [sequence] [blastp]
XP_024442811.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_002322315.3)
chlo 9  (predict for XP_024442811.2)
Subcellular
localization
TargetP
chlo 7  (predict for XP_002322315.3)
chlo 7  (predict for XP_024442811.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7456676

.
ppo-r.4
for
7456676

.
ppo-m.4
for
7456676

.
ppo-u.5
for
18103839

.
gma-u.5
for
SODB2

.
gma-u.5
for
SODB

.
gma-u.5
for
100814802

.
mtr-u.5
for
25483199

.
ath-u.5
for
FSD1

.
ath-u.5
for
FSD2

.
vvi-u.5
for
100258067

.
sly-u.5
for
FESOD

.
sly-u.5
for
101248277

.
osa-u.5
for
4339922

.
zma-u.5
for
100274012

.


Ortholog ID: 5809
Species ath gma gma sly sly osa zma bra bra vvi ppo ppo mtr tae ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol FSD2 LOC100813221 SODB2 FESOD LOC101248277 LOC4339922 LOC100274012 LOC103857203 FSD1 LOC100258067 LOC18103839 LOC7456676 LOC25483199 LOC123151939 LOC107953603 LOC107937992 LOC106442544 LOC106346563 CHLRE_10g436050v5 LOC8066912 LOC102588174 LOC102577566 LOC102612585 LOC100838250 LOC107767307 LOC107819573
Function* Fe superoxide dismutase 2 superoxide dismutase [Fe], chloroplastic iron-superoxide dismutase iron superoxide dismutase superoxide dismutase [Fe], chloroplastic superoxide dismutase [Fe] 1, chloroplastic-like superoxide dismutase superoxide dismutase [Fe] 2, chloroplastic fibronectin type III and SPRY domain containing 1 superoxide dismutase [Fe], chloroplastic superoxide dismutase [Fe], chloroplastic superoxide dismutase [Fe], chloroplastic superoxide dismutase [Fe], chloroplastic superoxide dismutase [Fe] 1, chloroplastic superoxide dismutase [Fe], chloroplastic superoxide dismutase [Fe], chloroplastic superoxide dismutase [Fe] 1, chloroplastic superoxide dismutase [Fe] 1, chloroplastic uncharacterized protein superoxide dismutase [Fe] 1, chloroplastic superoxide dismutase [Fe], chloroplastic-like superoxide dismutase [Fe], chloroplastic superoxide dismutase [Fe], chloroplastic-like superoxide dismutase [Fe] 1, chloroplastic superoxide dismutase [Fe], chloroplastic superoxide dismutase [Fe], chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
zma04141 Protein processing in endoplasmic reticulum 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 2
cre00900 Terpenoid backbone biosynthesis 2
cre00290 Valine, leucine and isoleucine biosynthesis 2
cre00660 C5-Branched dibasic acid metabolism 2
cre01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
sbi01240 Biosynthesis of cofactors 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04146 Peroxisome 2
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04146 Peroxisome 2
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 4
nta00220 Arginine biosynthesis 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta00270 Cysteine and methionine metabolism 2
nta00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 4
nta00270 Cysteine and methionine metabolism 3
nta00470 D-Amino acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835183 100813221 547531 544259 101248277 4339922 100274012 103857203 103862899 100258067 18103839 7456676 25483199 123151939 107953603 107937992 106442544 106346563 5716112 8066912 102588174 102577566 102612585 100838250 107767307 107819573
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