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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7457130   F-box/kelch-repeat protein SKIP6 
 ppo-r.4   7457130   F-box/kelch-repeat protein SKIP6 
 ppo-m.4   7457130   F-box/kelch-repeat protein SKIP6 
 gma-u.5   100798508   F-box/kelch-repeat protein SKIP6 
 gma-u.5   100795539   F-box/kelch-repeat protein SKIP6 
 mtr-u.5   11433909   F-box/kelch-repeat protein SKIP6 
 vvi-u.5   100252600   F-box/kelch-repeat protein SKIP6 
 sly-u.5   101255193   F-box/kelch-repeat protein SKIP6 
 osa-u.5   4344258   F-box/kelch-repeat protein SKIP6 
 zma-u.5   100279526   uncharacterized LOC100279526 

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Top 50 coexpressed genes to 7457130 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7457130 (ppo-u.5 coexpression data)

CoexMap"7457130"


ppoLOC7457130 | Entrez gene ID : 7457130    
Species ppo gma mtr vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae ath bna ghi
Paralog 3 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_052310369.1 [sequence] [blastp]
XP_052310370.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  cyto 1,  plas 1,  extr 1,  vacu 1,  cyto_nucl 1,  nucl_plas 1,  cyto_plas 1  (predict for XP_052310369.1)
chlo 6,  nucl 1,  cyto 1,  plas 1,  extr 1,  vacu 1,  cyto_nucl 1,  nucl_plas 1,  cyto_plas 1  (predict for XP_052310370.1)
Subcellular
localization
TargetP
chlo 9,  other 3  (predict for XP_052310369.1)
chlo 9,  other 3  (predict for XP_052310370.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7457130

.
ppo-r.4
for
7457130

.
ppo-m.4
for
7457130

.
gma-u.5
for
100798508

.
gma-u.5
for
100795539

.
mtr-u.5
for
11433909

.
vvi-u.5
for
100252600

.
sly-u.5
for
101255193

.
osa-u.5
for
4344258

.
zma-u.5
for
100279526

.


Ortholog ID: 9993
Species gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol LOC100798508 LOC100795539 LOC101255193 LOC4344258 LOC100279526 LOC103864306 LOC100252600 LOC7457130 LOC11433909 LOC123187524 LOC123043731 LOC123424752 LOC107911652 LOC107899626 LOC106420773 LOC125601597 LOC8074436 LOC102589740 LOC102625146 LOC100833357 LOC107810324 LOC107810106
Function* F-box/kelch-repeat protein SKIP6 F-box/kelch-repeat protein SKIP6 F-box/kelch-repeat protein SKIP6 F-box/kelch-repeat protein SKIP6 uncharacterized LOC100279526 F-box/kelch-repeat protein SKIP6 F-box/kelch-repeat protein SKIP6 F-box/kelch-repeat protein SKIP6 F-box/kelch-repeat protein SKIP6 F-box/kelch-repeat protein SKIP6 F-box/kelch-repeat protein SKIP6 F-box/kelch-repeat protein SKIP6-like F-box/kelch-repeat protein SKIP6 F-box/kelch-repeat protein SKIP6 F-box/kelch-repeat protein SKIP6-like F-box/kelch-repeat protein SKIP6-like F-box/kelch-repeat protein SKIP6 F-box/kelch-repeat protein SKIP6-like F-box/kelch-repeat protein SKIP6 F-box/kelch-repeat protein SKIP6 F-box/kelch-repeat protein SKIP6 F-box/kelch-repeat protein SKIP6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma00730 Thiamine metabolism 2
gma01240 Biosynthesis of cofactors 2
gma04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00290 Valine, leucine and isoleucine biosynthesis 4
sot01230 Biosynthesis of amino acids 4
sot00770 Pantothenate and CoA biosynthesis 3
sot01210 2-Oxocarboxylic acid metabolism 3
sot00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100798508 100795539 101255193 4344258 100279526 103864306 100252600 7457130 11433909 123187524 123043731 123424752 107911652 107899626 106420773 125601597 8074436 102589740 102625146 100833357 107810324 107810106
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