ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7457935	uncharacterized LOC7457935
ppo-r.4	7457935	uncharacterized LOC7457935
ppo-m.4	7457935	uncharacterized LOC7457935
ppo-u.5	18102727	uncharacterized LOC18102727
gma-u.5	100805458	uncharacterized LOC100805458
gma-u.5	100804386	uncharacterized LOC100804386
gma-u.5	100799357	uncharacterized LOC100799357
mtr-u.5	25484138	uncharacterized LOC25484138
mtr-u.5	25484139	uncharacterized LOC25484139
ath-u.5	SLT1	HSP20-like chaperones superfamily protein
ath-u.5	FYD	FYD
bra-r.6	103845449	uncharacterized LOC103845449
bra-r.6	103867183	uncharacterized LOC103867183
vvi-u.5	100243332	uncharacterized LOC100243332
vvi-u.5	100247953	uncharacterized LOC100247953
vvi-u.5	100254432	uncharacterized LOC100254432
ghi-r.1	107899301	uncharacterized LOC107899301
ghi-r.1	107904120	uncharacterized LOC107904120
ghi-r.1	107906542	uncharacterized LOC107906542
bna-r.1	106377473	uncharacterized LOC106377473
bna-r.1	106396042	uncharacterized LOC106396042
bna-r.1	106451041	uncharacterized LOC106451041
cit-r.1	102609802	uncharacterized LOC102609802
cit-r.1	102615832	hypothetical protein
sly-u.5	101262100	uncharacterized LOC101262100
sly-u.5	101258910	uncharacterized LOC101258910
sly-u.5	101254022	uncharacterized LOC101254022
sot-r.1	102587904	uncharacterized LOC102587904
sot-r.1	102580463	uncharacterized LOC102580463
sot-r.1	102603286	uncharacterized LOC102603286
nta-r.1	107816555	uncharacterized LOC107816555
nta-r.1	107823109	uncharacterized LOC107823109
nta-r.1	107802281	uncharacterized LOC107802281
osa-u.5	4327389	uncharacterized LOC4327389
osa-u.5	4324523	uncharacterized LOC4324523
osa-u.5	4332419	uncharacterized LOC4332419
zma-u.5	100281390	SLT1 protein
zma-u.5	100383256	HSP20-like chaperones superfamily protein
zma-u.5	100281384	uncharacterized LOC100281384
tae-r.2	123068638	uncharacterized LOC123068638
tae-r.2	123060154	uncharacterized LOC123060154
tae-r.2	123062540	uncharacterized LOC123062540
hvu-r.1	123442701	uncharacterized LOC123442701
hvu-r.1	123444935	uncharacterized LOC123444935
hvu-r.1	123449007	uncharacterized LOC123449007
sbi-r.1	110435391	uncharacterized LOC110435391
sbi-r.1	8060796	uncharacterized LOC8060796
sbi-r.1	8057777	uncharacterized LOC8057777
bdi-r.1	100821387	uncharacterized LOC100821387
bdi-r.1	100840710	uncharacterized LOC100840710

Top 50 coexpressed genes to 7457935 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7457935 (ppo-u.5 coexpression data)

CoexMap"7457935"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002312087.1 [sequence] [blastp]
XP_024462981.1 [sequence] [blastp]
XP_024462982.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 1, chlo 1, vacu 1, cysk 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1	(predict for XP_002312087.1)
nucl 6, cyto 1, chlo 1, vacu 1, cysk 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1	(predict for XP_024462981.1)
nucl 6, cyto 1, chlo 1, vacu 1, cysk 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1	(predict for XP_024462982.1)

Subcellular
localization
TargetP

other 6, chlo 3	(predict for XP_002312087.1)
other 6, chlo 3	(predict for XP_024462981.1)
other 6, chlo 3	(predict for XP_024462982.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7457935	ppo-r.4 for 7457935	ppo-m.4 for 7457935	ppo-u.5 for 18102727	gma-u.5 for 100805458	gma-u.5 for 100804386	gma-u.5 for 100799357	mtr-u.5 for 25484138	mtr-u.5 for 25484139	ath-u.5 for SLT1	ath-u.5 for FYD	bra-r.6 for 103845449	bra-r.6 for 103867183	vvi-u.5 for 100243332	vvi-u.5 for 100247953	vvi-u.5 for 100254432	ghi-r.1 for 107899301	ghi-r.1 for 107904120	ghi-r.1 for 107906542	bna-r.1 for 106377473	bna-r.1 for 106396042	bna-r.1 for 106451041	cit-r.1 for 102609802	cit-r.1 for 102615832	sly-u.5 for 101262100	sly-u.5 for 101258910	sly-u.5 for 101254022	sot-r.1 for 102587904	sot-r.1 for 102580463	sot-r.1 for 102603286	nta-r.1 for 107816555	nta-r.1 for 107823109	nta-r.1 for 107802281	osa-u.5 for 4327389	osa-u.5 for 4324523	osa-u.5 for 4332419	zma-u.5 for 100281390	zma-u.5 for 100383256	zma-u.5 for 100281384	tae-r.2 for 123068638	tae-r.2 for 123060154	tae-r.2 for 123062540	hvu-r.1 for 123442701	hvu-r.1 for 123444935	hvu-r.1 for 123449007	sbi-r.1 for 110435391	sbi-r.1 for 8060796	sbi-r.1 for 8057777	bdi-r.1 for 100821387	bdi-r.1 for 100840710

Ortholog

Ortholog ID: 1734

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

SLT1

FYD

Function^*

uncharacterized LOC7457935

uncharacterized LOC18102727

uncharacterized LOC100805458

uncharacterized LOC100804386

uncharacterized LOC100790021

uncharacterized LOC25484138

uncharacterized LOC25484139

HSP20-like chaperones superfamily protein

FYD

uncharacterized LOC103845449

uncharacterized LOC103867183

uncharacterized LOC100243332

uncharacterized LOC100247953

uncharacterized LOC100254432

uncharacterized LOC107958016

uncharacterized LOC107958017

uncharacterized LOC107887378

uncharacterized LOC106377473

uncharacterized LOC106396042

uncharacterized LOC106451041

uncharacterized LOC102609802

hypothetical protein

uncharacterized LOC101262100

uncharacterized LOC101258910

uncharacterized LOC101254022

uncharacterized LOC102587904

uncharacterized LOC102603286

uncharacterized LOC102594561

uncharacterized LOC107823109

uncharacterized LOC107799869

uncharacterized LOC107762520

uncharacterized LOC4327389

uncharacterized LOC4324523

uncharacterized LOC4332419

HSP20-like chaperones superfamily protein

uncharacterized LOC100281384

SLT1 protein

uncharacterized LOC123062540

uncharacterized LOC123079699

uncharacterized LOC123097886

uncharacterized LOC123442701

uncharacterized LOC123444935

uncharacterized LOC123449007

uncharacterized LOC110435391

uncharacterized LOC8060796

uncharacterized LOC8057777

uncharacterized LOC100821387

uncharacterized LOC100840710

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	4
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	4
ppo04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03022	Basal transcription factors	2
ath03040	Spliceosome	2
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	3
bra00564	Glycerophospholipid metabolism	2
bra01200	Carbon metabolism	2
bra01210	2-Oxocarboxylic acid metabolism	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	3
vvi04016	MAPK signaling pathway - plant	2
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	4
vvi04075	Plant hormone signal transduction	4
vvi04626	Plant-pathogen interaction	2
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00230	Purine metabolism	4
ghi00010	Glycolysis / Gluconeogenesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03250	Viral life cycle - HIV-1	5
bna00561	Glycerolipid metabolism	3
bna00564	Glycerophospholipid metabolism	3
bna04070	Phosphatidylinositol signaling system	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	3
sot04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04712	Circadian rhythm - plant	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04712	Circadian rhythm - plant	2
nta03015	mRNA surveillance pathway	2
nta04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	4
nta03015	mRNA surveillance pathway	2
nta04382	Cornified envelope formation	2
nta04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	2
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	3
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00290	Valine, leucine and isoleucine biosynthesis	3
tae00650	Butanoate metabolism	3
tae00660	C5-Branched dibasic acid metabolism	3
tae00770	Pantothenate and CoA biosynthesis	3
tae01210	2-Oxocarboxylic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00290	Valine, leucine and isoleucine biosynthesis	3
tae00650	Butanoate metabolism	3
tae00660	C5-Branched dibasic acid metabolism	3
tae00770	Pantothenate and CoA biosynthesis	3
tae01210	2-Oxocarboxylic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	3
hvu04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	6

Expression

Expression pattern

Entrez Gene ID^*

7457935

18102727

100805458

100804386

100790021

25484138

25484139

818333

820437

103845449

103867183

100243332

100247953

100254432

107958016

107958017

107887378

106377473

106396042

106451041

102609802

102615832

101262100

101258910

101254022

102587904

102603286

102594561

107823109

107799869

107762520

4327389

4324523

4332419

100383256

100281384

100279810

123062540

123079699

123097886

123442701

123444935

123449007

110435391

8060796

8057777

100821387

100840710

The preparation time of this page was 0.1 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	2	2	2	3	3	3	2	3	3	3	3	3	3	3	3	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7457935 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7457935 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**