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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7458136   telomere repeat-binding protein 3 
 ppo-r.4   7458136   telomere repeat-binding protein 3 
 ppo-u.5   7465106   telomere repeat-binding protein 2 
 ppo-u.5   7467553   telomere repeat-binding protein 3 
 ppo-u.5   7487260   telomere repeat-binding protein 5 
 gma-u.5   100792533   telomere repeat-binding protein 1 
 gma-u.5   100816121   telomere repeat-binding protein 2 
 gma-u.5   100814318   telomere repeat-binding protein 3 
 mtr-u.5   11417600   telomere repeat-binding protein 5 
 mtr-u.5   11436475   telomere repeat-binding protein 4 
 mtr-u.5   25489316   telomere repeat-binding protein 2 
 ath-u.5   TRFL9   TRF-like 9 
 ath-u.5   TRFL1   TRF-like 1 
 ath-u.5   TBP1   telomeric DNA binding protein 1 
 vvi-u.5   100259786   telomere repeat-binding protein 4 
 vvi-u.5   100257090   telomere repeat-binding protein 5 
 vvi-u.5   100247654   telomere repeat-binding protein 5 
 sly-u.5   101255981   telomere repeat-binding protein 3 
 sly-u.5   101255102   telomere repeat-binding protein 5-like 
 sly-u.5   101246932   telomere repeat-binding protein 5 
 osa-u.5   4332403   telomere repeat-binding protein 5 
 zma-u.5   542534   initiator-binding protein 2 
 zma-u.5   111589230   uncharacterized LOC111589230 
 zma-u.5   542426   initiator binding protein 

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Top 50 coexpressed genes to 7458136 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7458136 (ppo-u.5 coexpression data)

CoexMap"7458136"


ppoLOC7458136 | Entrez gene ID : 7458136    
Species ppo gma mtr ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 5 3 3 3 3 3 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_002316279.2 [sequence] [blastp]
XP_006378702.1 [sequence] [blastp]
XP_006378703.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  mito 4,  chlo 1,  pero 1  (predict for XP_002316279.2)
nucl 4,  mito 4,  chlo 1,  pero 1  (predict for XP_006378702.1)
nucl 4,  mito 4,  chlo 1,  pero 1  (predict for XP_006378703.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_002316279.2)
mito 6  (predict for XP_006378702.1)
mito 6  (predict for XP_006378703.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7458136

.
ppo-r.4
for
7458136

.
ppo-u.5
for
7465106

.
ppo-u.5
for
7467553

.
ppo-u.5
for
7487260

.
gma-u.5
for
100792533

.
gma-u.5
for
100816121

.
gma-u.5
for
100814318

.
mtr-u.5
for
11417600

.
mtr-u.5
for
11436475

.
mtr-u.5
for
25489316

.
ath-u.5
for
TRFL9

.
ath-u.5
for
TRFL1

.
ath-u.5
for
TBP1

.
vvi-u.5
for
100259786

.
vvi-u.5
for
100257090

.
vvi-u.5
for
100247654

.
sly-u.5
for
101255981

.
sly-u.5
for
101255102

.
sly-u.5
for
101246932

.
osa-u.5
for
4332403

.
zma-u.5
for
542534

.
zma-u.5
for
111589230

.
zma-u.5
for
542426

.


Ortholog ID: 1079
Species ath gma gma sly sly osa zma zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi sbi sbi sot sot cit cit bdi bdi nta nta
Symbol TRFL1 LOC100801280 LOC100795471 TBP1 LOC101255981 LOC4332403 LOC542534 LOC111589230 LOC103870245 LOC100257090 LOC100247654 LOC7487260 LOC7467553 LOC11417600 LOC25498486 LOC123080999 LOC123097910 LOC123449022 LOC123445700 LOC107906563 LOC107900464 LOC8081507 LOC8073576 LOC102578199 LOC102598179 LOC102622616 LOC102622190 LOC100834090 LOC100830660 LOC107816727 LOC107809816
Function* TRF-like 1 telomere repeat-binding protein 5 telomere repeat-binding protein 3 telomere binding protein telomere repeat-binding protein 3 telomere repeat-binding protein 5 initiator-binding protein 2 uncharacterized LOC111589230 telomere repeat-binding protein 3 telomere repeat-binding protein 5 telomere repeat-binding protein 5 telomere repeat-binding protein 5 telomere repeat-binding protein 3 telomere repeat-binding protein 5 telomere repeat-binding protein 5 telomere-binding protein 1 telomere repeat-binding protein 5 telomere repeat-binding protein 5-like telomere-binding protein 1-like telomere repeat-binding protein 5 telomere repeat-binding protein 4 telomere repeat-binding protein 5 telomere-binding protein 1 telomere repeat-binding protein 4-like telomere repeat-binding protein 5-like telomere repeat-binding protein 5 telomere repeat-binding protein 4 telomere-binding protein 1 telomere repeat-binding protein 5 telomere repeat-binding protein 4 telomere repeat-binding protein 5-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
gma00190 Oxidative phosphorylation 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 3
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 4
osa01240 Biosynthesis of cofactors 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma00520 Amino sugar and nucleotide sugar metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 5
ghi04141 Protein processing in endoplasmic reticulum 3
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 3
sot00100 Steroid biosynthesis 2
sot00561 Glycerolipid metabolism 2
sot00564 Glycerophospholipid metabolism 2
sot00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 3
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823812 100801280 100795471 100147728 101255981 4332403 542534 111589230 103870245 100257090 100247654 7487260 7467553 11417600 25498486 123080999 123097910 123449022 123445700 107906563 107900464 8081507 8073576 102578199 102598179 102622616 102622190 100834090 100830660 107816727 107809816
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