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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7458617   chalcone--flavanone isomerase 
 ppo-r.4   7458617   chalcone--flavanone isomerase 
 ppo-m.4   7458617   chalcone--flavanone isomerase 
 gma-u.5   CHI2-A   chalcone--flavonone isomerase 2-A 
 mtr-u.5   25497742   chalcone--flavonone isomerase 2 
 mtr-u.5   11446745   chalcone--flavonone isomerase 2 
 mtr-u.5   11445536   chalcone--flavonone isomerase 2 
 ath-u.5   TT5   Chalcone-flavanone isomerase family protein 
 ath-u.5   AT5G66230   Chalcone-flavanone isomerase family protein 
 vvi-u.5   CHI   chalcone isomerase 
 sly-u.5   CHI2   chalcone--flavonone isomerase 
 sly-u.5   CHI1   chalcone--flavonone isomerase 1 
 osa-u.5   4334588   chalcone--flavonone isomerase-like 
 zma-u.5   100276821   chalcone flavanone isomerase 1 
 zma-u.5   100275381   uncharacterized LOC100275381 

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Top 50 coexpressed genes to 7458617 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7458617 (ppo-u.5 coexpression data)

CoexMap"7458617"


ppoLOC7458617 | Entrez gene ID : 7458617    
Species ppo gma mtr ath vvi sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 3 1 3 2 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00941 [list] [network] Flavonoid biosynthesis (69 genes)
GO BP
GO:0009813 [list] [network] flavonoid biosynthetic process  (5 genes)  IEA  
GO CC
GO MF
GO:0045430 [list] [network] chalcone isomerase activity  (1 genes)  IEA  
Protein XP_002315258.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1,  mito 1,  cysk 1,  cysk_nucl 1  (predict for XP_002315258.1)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for XP_002315258.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7458617
ppo-r.4
for
7458617
ppo-m.4
for
7458617
gma-u.5
for
CHI2-A
mtr-u.5
for
25497742
mtr-u.5
for
11446745
mtr-u.5
for
11445536
ath-u.5
for
TT5
ath-u.5
for
AT5G66230
vvi-u.5
for
CHI
sly-u.5
for
CHI2
sly-u.5
for
CHI1
osa-u.5
for
4334588
zma-u.5
for
100276821
zma-u.5
for
100275381


Ortholog ID: 6023
Species ppo gma mtr mtr ath bra bra vvi ghi ghi bna bna cit sly sly sot nta nta osa zma zma tae tae hvu sbi bdi
Symbol LOC7458617 CHI2-A LOC11445536 LOC25497742 TT5 LOC103841428 LOC103830010 CHI LOC107886193 LOC107940815 LOC106412109 LOC111200610 CHI CHI2 CHI1 LOC102599379 CHI LOC107825576 LOC4334588 LOC100276821 LOC100275381 LOC123105650 LOC123160748 LOC123453018 LOC8057048 LOC100839250
Function* chalcone--flavanone isomerase chalcone--flavonone isomerase 2-A chalcone--flavonone isomerase 2 chalcone--flavonone isomerase 2 Chalcone-flavanone isomerase family protein chalcone--flavonone isomerase chalcone--flavonone isomerase chalcone isomerase chalcone--flavonone isomerase-like chalcone--flavonone isomerase chalcone--flavanone isomerase chalcone--flavanone isomerase-like chalcone--flavonone isomerase-like chalcone--flavonone isomerase chalcone--flavonone isomerase 1 chalcone--flavonone isomerase B chalcone--flavonone isomerase chalcone--flavanone isomerase-like chalcone--flavonone isomerase-like chalcone flavanone isomerase 1 uncharacterized LOC100275381 chalcone--flavanone isomerase chalcone--flavanone isomerase chalcone--flavanone isomerase chalcone--flavonone isomerase chalcone--flavonone isomerase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00941 Flavonoid biosynthesis 11
ppo01200 Carbon metabolism 2
ppo00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 8
gma00941 Flavonoid biosynthesis 5
gma00360 Phenylalanine metabolism 4
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
gma00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 3
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 3
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00941 Flavonoid biosynthesis 5
ath00944 Flavone and flavonol biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00941 Flavonoid biosynthesis 9
bra04712 Circadian rhythm - plant 3
bra01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00941 Flavonoid biosynthesis 8
bra00940 Phenylpropanoid biosynthesis 4
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00941 Flavonoid biosynthesis 9
vvi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 12
ghi04712 Circadian rhythm - plant 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 12
ghi04712 Circadian rhythm - plant 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00941 Flavonoid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00941 Flavonoid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00941 Flavonoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00941 Flavonoid biosynthesis 2
sly00190 Oxidative phosphorylation 2
sly04075 Plant hormone signal transduction 2
sly00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00941 Flavonoid biosynthesis 7
sly00944 Flavone and flavonol biosynthesis 2
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00941 Flavonoid biosynthesis 9
sot04712 Circadian rhythm - plant 3
sot00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00941 Flavonoid biosynthesis 12
nta04712 Circadian rhythm - plant 4
nta00944 Flavone and flavonol biosynthesis 3
nta00062 Fatty acid elongation 2
nta01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00941 Flavonoid biosynthesis 10
nta04712 Circadian rhythm - plant 4
nta00944 Flavone and flavonol biosynthesis 3
nta00062 Fatty acid elongation 2
nta01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00941 Flavonoid biosynthesis 6
osa00944 Flavone and flavonol biosynthesis 2
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00941 Flavonoid biosynthesis 7
zma04712 Circadian rhythm - plant 2
zma00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00941 Flavonoid biosynthesis 18
tae04712 Circadian rhythm - plant 5
tae00940 Phenylpropanoid biosynthesis 5
tae00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00941 Flavonoid biosynthesis 5
hvu04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00941 Flavonoid biosynthesis 13
sbi04712 Circadian rhythm - plant 8
sbi00944 Flavone and flavonol biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00941 Flavonoid biosynthesis 7
bdi00944 Flavone and flavonol biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7458617 732546 11445536 25497742 824678 103841428 103830010 100233078 107886193 107940815 106412109 111200610 102615441 101250693 101249265 102599379 107779699 107825576 4334588 100276821 100275381 123105650 123160748 123453018 8057048 100839250
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