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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7459554   pentatricopeptide repeat-containing protein At1g06143 
 mtr-u.5   25498248   pentatricopeptide repeat-containing protein At1g06143 
 ath-u.5   AT1G06143   basic helix loop helix DNA-binding superfamily protein 
 vvi-u.5   100264065   pentatricopeptide repeat-containing protein At1g06143 
 sly-u.5   101263971   pentatricopeptide repeat-containing protein At1g06143 

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Top 50 coexpressed genes to 7459554 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7459554 (ppo-m.4 coexpression data)

CoexMap"7459554"


ppoLOC7459554 | Entrez gene ID : 7459554    
Species ppo mtr ath vvi sly sbi nta bra osa cre cit hvu bdi sot zma tae bna ghi gma
Paralog 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024450819.1 [sequence] [blastp]
XP_024450820.1 [sequence] [blastp]
XP_052306262.1 [sequence] [blastp]
XP_052306263.1 [sequence] [blastp]
XP_052306264.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_024450819.1)
chlo 10  (predict for XP_024450820.1)
chlo 10  (predict for XP_052306262.1)
chlo 10  (predict for XP_052306263.1)
chlo 10  (predict for XP_052306264.1)
Subcellular
localization
TargetP
other 4  (predict for XP_024450819.1)
other 4  (predict for XP_024450820.1)
other 4  (predict for XP_052306262.1)
other 4  (predict for XP_052306263.1)
other 4  (predict for XP_052306264.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7459554

.
mtr-u.5
for
25498248

.
ath-u.5
for
AT1G06143

.
vvi-u.5
for
100264065

.
sly-u.5
for
101263971

.


Ortholog ID: 13238
Species ath sly bra vvi mtr ghi ghi bna
Symbol AT1G06143 LOC101263971 LOC103843567 LOC100264065 LOC25498248 LOC107915076 LOC121204953 LOC106419844
Function* basic helix loop helix DNA-binding superfamily protein pentatricopeptide repeat-containing protein At1g06143 pentatricopeptide repeat-containing protein At1g06143 pentatricopeptide repeat-containing protein At1g06143 pentatricopeptide repeat-containing protein At1g06143 pentatricopeptide repeat-containing protein At1g06143 pentatricopeptide repeat-containing protein At1g06143 pentatricopeptide repeat-containing protein At1g06143-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 28716441 101263971 103843567 100264065 25498248 107915076 121204953 106419844
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