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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7459794   pentatricopeptide repeat-containing protein At1g71060, mitochondrial 
 gma-u.5   102662910   pentatricopeptide repeat-containing protein At1g71060, mitochondrial 
 gma-u.5   100813927   pentatricopeptide repeat-containing protein At1g71060, mitochondrial 
 mtr-u.5   11419364   pentatricopeptide repeat-containing protein At1g71060, mitochondrial 
 ath-u.5   AT1G71060   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100245565   pentatricopeptide repeat-containing protein At1g71060, mitochondrial 
 sly-u.5   101259043   pentatricopeptide repeat-containing protein At1g71060, mitochondrial 
 osa-u.5   4324492   pentatricopeptide repeat-containing protein At1g71060, mitochondrial 
 zma-u.5   100281443   GTP binding protein 

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Top 50 coexpressed genes to 7459794 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7459794 (ppo-m.4 coexpression data)

CoexMap"7459794"


ppoLOC7459794 | Entrez gene ID : 7459794    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002315895.4 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for XP_002315895.4)
Subcellular
localization
TargetP
chlo 7,  mito 4  (predict for XP_002315895.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7459794

.
gma-u.5
for
102662910

.
gma-u.5
for
100813927

.
mtr-u.5
for
11419364

.
ath-u.5
for
AT1G71060

.
vvi-u.5
for
100245565

.
sly-u.5
for
101259043

.
osa-u.5
for
4324492

.
zma-u.5
for
100281443

.


Ortholog ID: 11118
Species ath gma gma sly osa zma bra vvi mtr ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G71060 LOC100813927 LOC102662910 LOC101259043 LOC4324492 LOC100281443 LOC103852699 LOC100245565 LOC11419364 LOC107886440 LOC107910028 LOC106394962 LOC125582037 LOC8070760 LOC102604267 LOC102629628 LOC100835204 LOC107772966 LOC107826771
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g71060, mitochondrial pentatricopeptide repeat-containing protein At1g71060, mitochondrial pentatricopeptide repeat-containing protein At1g71060, mitochondrial pentatricopeptide repeat-containing protein At1g71060, mitochondrial GTP binding protein pentatricopeptide repeat-containing protein At1g71060, mitochondrial pentatricopeptide repeat-containing protein At1g71060, mitochondrial pentatricopeptide repeat-containing protein At1g71060, mitochondrial pentatricopeptide repeat-containing protein At1g71060, mitochondrial pentatricopeptide repeat-containing protein At1g71060, mitochondrial-like pentatricopeptide repeat-containing protein At1g71060, mitochondrial pentatricopeptide repeat-containing protein At1g71060, mitochondrial-like pentatricopeptide repeat-containing protein At1g71060, mitochondrial pentatricopeptide repeat-containing protein At1g71060, mitochondrial pentatricopeptide repeat-containing protein At1g71060, mitochondrial pentatricopeptide repeat-containing protein At1g71060, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00261 Monobactam biosynthesis 2
nta00300 Lysine biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843446 100813927 102662910 101259043 4324492 100281443 103852699 100245565 11419364 107886440 107910028 106394962 125582037 8070760 102604267 102629628 100835204 107772966 107826771
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