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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7461660   paired amphipathic helix protein Sin3-like 1 
 ppo-r.4   7461660   paired amphipathic helix protein Sin3-like 1 
 ppo-m.4   7461660   paired amphipathic helix protein Sin3-like 1 
 gma-u.5   106799801   paired amphipathic helix protein Sin3-like 3 
 mtr-u.5   11419241   paired amphipathic helix protein Sin3-like 1 
 vvi-u.5   100250081   paired amphipathic helix protein Sin3-like 3 
 zma-u.5   100277534   uncharacterized LOC100277534 
 zma-u.5   103641168   paired amphipathic helix protein Sin3-like 6 

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Top 50 coexpressed genes to 7461660 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7461660 (ppo-u.5 coexpression data)

CoexMap"7461660"


ppoLOC7461660 | Entrez gene ID : 7461660    
Species ppo gma mtr vvi zma hvu osa sot tae nta bra cit ghi bna bdi sly ath sbi cre
Paralog 3 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000122 [list] [network] negative regulation of transcription by RNA polymerase II  (24 genes)  IEA  
GO CC
GO:0000118 [list] [network] histone deacetylase complex  (35 genes)  IEA  
GO:0000785 [list] [network] chromatin  (236 genes)  IEA  
GO MF
GO:0003714 [list] [network] transcription corepressor activity  (36 genes)  IEA  
Protein XP_002298689.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cysk 4,  cyto 1  (predict for XP_002298689.2)
Subcellular
localization
TargetP
other 8  (predict for XP_002298689.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7461660

.
ppo-r.4
for
7461660

.
ppo-m.4
for
7461660

.
gma-u.5
for
106799801

.
mtr-u.5
for
11419241

.
vvi-u.5
for
100250081

.
zma-u.5
for
100277534

.
zma-u.5
for
103641168

.


Ortholog ID: 2293
Species ath gma zma zma vvi ppo hvu sot
Symbol AT5G15025 LOC106799801 LOC100277534 LOC103641168 LOC100250081 LOC7461660 LOC123448359 LOC107058805
Function* paired amphipathic helix Sin3-like protein paired amphipathic helix protein Sin3-like 3 uncharacterized LOC100277534 paired amphipathic helix protein Sin3-like 6 paired amphipathic helix protein Sin3-like 3 paired amphipathic helix protein Sin3-like 1 uncharacterized LOC123448359 paired amphipathic helix protein Sin3-like 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00380 Tryptophan metabolism 2
zma00630 Glyoxylate and dicarboxylate metabolism 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 13
sot00190 Oxidative phosphorylation 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 28721159 106799801 100277534 103641168 100250081 7461660 123448359 107058805
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