Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4  7461966  pentatricopeptide repeat-containing protein At3g47530 
 gma-u.5  100788135  pentatricopeptide repeat-containing protein At3g47530 
 mtr-u.5  120580098  pentatricopeptide repeat-containing protein At3g47530 
 ath-u.5  AT3G47530  Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5  100258783  pentatricopeptide repeat-containing protein At3g47530 
 sly-u.5  101263802  pentatricopeptide repeat-containing protein At3g47530 
 osa-u.5  4345655  pentatricopeptide repeat-containing protein At3g47530 
 zma-u.5  100281656  uncharacterized LOC100281656 

close


Top 50 coexpressed genes to 7461966 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 7461966 (ppo-m.4 coexpression data)

CoexMap"7461966"


ppoLOC7461966 | Entrez gene ID : 7461966
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002304264.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_002304264.3)
Subcellular
localization
TargetP
mito 3,  other 3  (predict for XP_002304264.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ppo-m.4
for
7461966

.

gma-u.5
for
100788135

.

mtr-u.5
for
120580098

.

ath-u.5
for
AT3G47530

.

vvi-u.5
for
100258783

.

sly-u.5
for
101263802

.

osa-u.5
for
4345655

.

zma-u.5
for
100281656

.


Ortholog ID: 9522
Species ath gma sly osa zma bra vvi mtr hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT3G47530 LOC100788135 LOC101263802 LOC4345655 LOC100281656 LOC103873580 LOC100258783 LOC120580098 LOC123450212 LOC121206432 LOC107931391 LOC106347714 LOC125594336 LOC8075670 LOC102599249 LOC102628238 LOC100842869 LOC107783259 LOC107821464
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g47530 pentatricopeptide repeat-containing protein At3g47530 pentatricopeptide repeat-containing protein At3g47530 uncharacterized LOC100281656 pentatricopeptide repeat-containing protein At3g47530 pentatricopeptide repeat-containing protein At3g47530 pentatricopeptide repeat-containing protein At3g47530 pentatricopeptide repeat-containing protein At3g47530-like pentatricopeptide repeat-containing protein At3g47530-like pentatricopeptide repeat-containing protein At3g47530 pentatricopeptide repeat-containing protein At3g47530-like pentatricopeptide repeat-containing protein At3g47530-like pentatricopeptide repeat-containing protein At3g47530 pentatricopeptide repeat-containing protein At3g47530 pentatricopeptide repeat-containing protein At3g47530 pentatricopeptide repeat-containing protein At3g47530 pentatricopeptide repeat-containing protein At3g47530-like pentatricopeptide repeat-containing protein At3g47530-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823907 100788135 101263802 4345655 100281656 103873580 100258783 120580098 123450212 121206432 107931391 106347714 125594336 8075670 102599249 102628238 100842869 107783259 107821464
The preparation time of this page was 0.1 [sec].