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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7463000   40S ribosomal protein S14 
 ppo-r.4   7463000   40S ribosomal protein S14 
 ppo-m.4   7463000   40S ribosomal protein S14 
 ppo-u.5   7497065   40S ribosomal protein S14 
 ppo-u.5   7491107   40S ribosomal protein S14 
 ppo-u.5   7478501   40S ribosomal protein S14 
 gma-u.5   100306566   uncharacterized LOC100306566 
 gma-u.5   100785807   40S ribosomal protein S14 
 gma-u.5   100786325   40S ribosomal protein S14 
 mtr-u.5   11440830   40S ribosomal protein S14 
 mtr-u.5   11442711   40S ribosomal protein S14 
 ath-u.5   AT2G36160   Ribosomal protein S11 family protein 
 ath-u.5   AT3G11510   Ribosomal protein S11 family protein 
 ath-u.5   AT3G52580   Ribosomal protein S11 family protein 
 vvi-u.5   100256298   small ribosomal subunit protein uS11z 
 vvi-u.5   100255492   small ribosomal subunit protein uS11z 
 vvi-u.5   100248468   40S ribosomal protein S14-like 
 sly-u.5   101245320   ribosomal protein S11 family protein 
 sly-u.5   101247549   small ribosomal subunit protein uS11y 
 sly-u.5   101256436   small ribosomal subunit protein uS11y 
 osa-u.5   4328392   small ribosomal subunit protein uS11z 
 osa-u.5   4329563   small ribosomal subunit protein uS11y 
 osa-u.5   4335791   small ribosomal subunit protein uS11y 
 zma-u.5   100216896   40S ribosomal protein S14 
 zma-u.5   100286294   40S ribosomal protein S14 
 zma-u.5   103629631   40S ribosomal protein S14-like 

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Top 50 coexpressed genes to 7463000 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7463000 (ppo-u.5 coexpression data)

CoexMap"7463000"


ppoLOC7463000 | Entrez gene ID : 7463000    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 3 2 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03010 [list] [network] Ribosome (698 genes)
GO BP
GO:0000028 [list] [network] ribosomal small subunit assembly  (34 genes)  IEA  
GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (43 genes)  IEA  
GO:0006412 [list] [network] translation  (598 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (109 genes)  IEA  
GO:0005840 [list] [network] ribosome  (453 genes)  IEA  
GO MF
GO:0048027 [list] [network] mRNA 5'-UTR binding  (5 genes)  IEA  
GO:0070181 [list] [network] small ribosomal subunit rRNA binding  (15 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
Protein XP_002305998.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_002305998.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for XP_002305998.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7463000

.
ppo-r.4
for
7463000

.
ppo-m.4
for
7463000

.
ppo-u.5
for
7497065

.
ppo-u.5
for
7491107

.
ppo-u.5
for
7478501

.
gma-u.5
for
100306566

.
gma-u.5
for
100785807

.
gma-u.5
for
100786325

.
mtr-u.5
for
11440830

.
mtr-u.5
for
11442711

.
ath-u.5
for
AT2G36160

.
ath-u.5
for
AT3G11510

.
ath-u.5
for
AT3G52580

.
vvi-u.5
for
100256298

.
vvi-u.5
for
100255492

.
vvi-u.5
for
100248468

.
sly-u.5
for
101245320

.
sly-u.5
for
101247549

.
sly-u.5
for
101256436

.
osa-u.5
for
4328392

.
osa-u.5
for
4329563

.
osa-u.5
for
4335791

.
zma-u.5
for
100216896

.
zma-u.5
for
100286294

.
zma-u.5
for
103629631

.


Ortholog ID: 980
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT2G36160 AT3G11510 LOC100780604 LOC100787077 LOC101247549 LOC101245320 LOC4329563 LOC4335791 LOC100192550 LOC103629630 LOC117132552 LOC117132553 LOC100255492 LOC100256298 LOC7491107 LOC7463000 LOC11442711 LOC11440830 LOC123143951 LOC123045410 LOC123426668 LOC123408599 LOC107932416 LOC107896336 LOC106452480 LOC106391301 CHLRE_11g480150v5 LOC8058398 LOC8057471 LOC102581547 LOC102604893 LOC112495483 LOC102615517 LOC100842625 LOC100839846 LOC107771427 LOC107808558
Function* Ribosomal protein S11 family protein Ribosomal protein S11 family protein 40S ribosomal protein S14 40S ribosomal protein S14 small ribosomal subunit protein uS11y ribosomal protein S11 family protein small ribosomal subunit protein uS11y small ribosomal subunit protein uS11y 40S ribosomal protein S14-like 40S ribosomal protein S14-like 40S ribosomal protein S14-2 40S ribosomal protein S14-2 small ribosomal subunit protein uS11z small ribosomal subunit protein uS11z 40S ribosomal protein S14 40S ribosomal protein S14 40S ribosomal protein S14 40S ribosomal protein S14 40S ribosomal protein S14-3 40S ribosomal protein S14 40S ribosomal protein S14 40S ribosomal protein S14-like 40S ribosomal protein S14-2 40S ribosomal protein S14 40S ribosomal protein S14-2 40S ribosomal protein S14-2 ribosomal protein S14 40S ribosomal protein S14 40S ribosomal protein S14 40S ribosomal protein S14-2-like 40S ribosomal protein S14-2-like 40S ribosomal protein S14-3-like 40S ribosomal protein S14-3 40S ribosomal protein S14 40S ribosomal protein S14 40S ribosomal protein S14-2-like small ribosomal subunit protein uS11y
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 21
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
bra01230 Biosynthesis of amino acids 3
bra00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
tae03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 19
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
bna03030 DNA replication 2
bna03420 Nucleotide excision repair 2
bna03430 Mismatch repair 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 20
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 21
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818188 820324 100780604 100787077 101247549 101245320 4329563 4335791 100192550 103629630 117132552 117132553 100255492 100256298 7491107 7463000 11442711 11440830 123143951 123045410 123426668 123408599 107932416 107896336 106452480 106391301 5722926 8058398 8057471 102581547 102604893 112495483 102615517 100842625 100839846 107771427 107808558
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