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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7463318   SHUGOSHIN 2 
 ppo-u.5   7479850   shugoshin-1 
 ppo-u.5   18098245   SHUGOSHIN 2 
 ppo-u.5   7463463   SHUGOSHIN 2 
 gma-u.5   102665348   shugoshin-1 
 gma-u.5   100801538   shugoshin-1 
 mtr-u.5   11407170   shugoshin-1 
 ath-u.5   AT3G10440   Shugoshin C terminus 
 ath-u.5   AT3G44960   shugoshin 
 ath-u.5   AT5G04320   Shugoshin C terminus 
 bra-r.6   103847557   SHUGOSHIN 1 
 bra-r.6   103855564   SHUGOSHIN 2 
 vvi-u.5   100246085   SHUGOSHIN 2 
 vvi-u.5   100243057   shugoshin-1 
 ghi-r.1   107958547   shugoshin-1 
 ghi-r.1   107957417   SHUGOSHIN 2 
 ghi-r.1   107939521   SHUGOSHIN 1 
 bna-r.1   106351144   SHUGOSHIN 1 
 bna-r.1   106372534   SHUGOSHIN 2 
 cit-r.1   102625934   SHUGOSHIN 2 
 cit-r.1   102629425   SHUGOSHIN 2 
 sly-u.5   101264280   SHUGOSHIN 2 
 sly-u.5   101261484   SHUGOSHIN 2 
 sot-r.1   102579379   shugoshin-1 
 sot-r.1   102603395   uncharacterized LOC102603395 
 nta-r.1   107762740   SHUGOSHIN 1-like 
 nta-r.1   107791653   SHUGOSHIN 2 
 nta-r.1   107787827   uncharacterized LOC107787827 
 osa-u.5   4348802   shugoshin-1-like 
 zma-u.5   100284141   shugoshin-1 
 tae-r.2   123090246   shugoshin-1 
 tae-r.2   123044727   shugoshin-1 
 tae-r.2   123180959   shugoshin-1 
 hvu-r.1   123447312   shugoshin-1-like 
 sbi-r.1   8070526   shugoshin-1 
 bdi-r.1   100823493   shugoshin-1 

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Top 50 coexpressed genes to 7463318 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7463318 (ppo-m.4 coexpression data)

CoexMap"7463318"


ppoLOC7463318 | Entrez gene ID : 7463318    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 3 2 2 3 2 2 2 2 3 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034090 [list] [network] maintenance of meiotic sister chromatid cohesion  (4 genes)  IEA  
GO:0045144 [list] [network] meiotic sister chromatid segregation  (4 genes)  IEA  
GO CC
GO:0000775 [list] [network] chromosome, centromeric region  (35 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
Protein XP_024464255.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  mito 1,  cysk 1,  golg_plas 1  (predict for XP_024464255.1)
Subcellular
localization
TargetP
mito 7,  other 5  (predict for XP_024464255.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7463318
ppo-u.5
for
7479850
ppo-u.5
for
18098245
ppo-u.5
for
7463463
gma-u.5
for
102665348
gma-u.5
for
100801538
mtr-u.5
for
11407170
ath-u.5
for
AT3G10440
ath-u.5
for
AT3G44960
ath-u.5
for
AT5G04320
bra-r.6
for
103847557
bra-r.6
for
103855564
vvi-u.5
for
100246085
vvi-u.5
for
100243057
ghi-r.1
for
107958547
ghi-r.1
for
107957417
ghi-r.1
for
107939521
bna-r.1
for
106351144
bna-r.1
for
106372534
cit-r.1
for
102625934
cit-r.1
for
102629425
sly-u.5
for
101264280
sly-u.5
for
101261484
sot-r.1
for
102579379
sot-r.1
for
102603395
nta-r.1
for
107762740
nta-r.1
for
107791653
nta-r.1
for
107787827
osa-u.5
for
4348802
zma-u.5
for
100284141
tae-r.2
for
123090246
tae-r.2
for
123044727
tae-r.2
for
123180959
hvu-r.1
for
123447312
sbi-r.1
for
8070526
bdi-r.1
for
100823493


Ortholog ID: 3573
Species ppo ppo ppo gma gma mtr ath ath ath bra bra vvi vvi ghi ghi ghi bna bna cit cit sly sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC7479850 LOC18098245 LOC7463463 LOC102665348 LOC100801538 LOC11407170 AT3G10440 AT3G44960 AT5G04320 LOC103847557 LOC103855564 LOC100246085 LOC100243057 LOC107958547 LOC107957417 LOC107904159 LOC106351144 LOC106379396 LOC102625934 LOC102629425 LOC101264280 LOC101261484 LOC102579379 LOC102603395 LOC107762740 LOC107791653 LOC107787827 LOC4348802 LOC100284141 LOC123090246 LOC123044727 LOC123180959 LOC123447312 LOC8070526 LOC100823493
Function* shugoshin-1 SHUGOSHIN 2 SHUGOSHIN 2 shugoshin-1 shugoshin-1 shugoshin-1 Shugoshin C terminus shugoshin Shugoshin C terminus SHUGOSHIN 1 SHUGOSHIN 2 SHUGOSHIN 2 shugoshin-1 shugoshin-1 SHUGOSHIN 2 SHUGOSHIN 2 SHUGOSHIN 1 SHUGOSHIN 1 SHUGOSHIN 2 SHUGOSHIN 2 SHUGOSHIN 2 SHUGOSHIN 2 shugoshin-1 uncharacterized LOC102603395 SHUGOSHIN 1-like SHUGOSHIN 2 uncharacterized LOC107787827 shugoshin-1-like shugoshin-1 shugoshin-1 shugoshin-1 shugoshin-1 shugoshin-1-like shugoshin-1 shugoshin-1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04814 Motor proteins 3
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 3
gma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 2
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04148 Efferocytosis 2
ath04517 IgSF CAM signaling 2
ath04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 3
bra03410 Base excision repair 2
bra03420 Nucleotide excision repair 2
bra03430 Mismatch repair 2
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
ghi04518 Integrin signaling 2
ghi04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00520 Amino sugar and nucleotide sugar metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7479850 18098245 7463463 102665348 100801538 11407170 820208 823631 830311 103847557 103855564 100246085 100243057 107958547 107957417 107904159 106351144 106379396 102625934 102629425 101264280 101261484 102579379 102603395 107762740 107791653 107787827 4348802 100284141 123090246 123044727 123180959 123447312 8070526 100823493
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