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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7463449   ras-related protein RABF1 
 ppo-r.4   7463449   ras-related protein RABF1 
 ppo-m.4   7463449   ras-related protein RABF1 
 ppo-u.5   7479861   ras-related protein RABF1 
 gma-u.5   100500544   ras-related protein RABF1 
 gma-u.5   100305769   P-loop NTPase domain superfamily protein 
 mtr-u.5   25484933   ras-related protein RABF1 
 ath-u.5   ARA6   Ras-related small GTP-binding family protein 
 vvi-u.5   100259851   ras-related protein RABF1 
 sly-u.5   101245117   ras-related protein RABF1 
 osa-u.5   4331646   ras-related protein RABF1 
 osa-u.5   4348725   ras-related protein RABF1 
 zma-u.5   100282900   uncharacterized LOC100282900 

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Top 50 coexpressed genes to 7463449 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7463449 (ppo-u.5 coexpression data)

CoexMap"7463449"


ppoLOC7463449 | Entrez gene ID : 7463449    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop04144 [list] [network] Endocytosis (195 genes)
pop04145 [list] [network] Phagosome (117 genes)
pop04148 [list] [network] Efferocytosis (75 genes)
GO BP
GO CC
GO MF
GO:0003924 [list] [network] GTPase activity  (264 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (290 genes)  IEA  
Protein XP_002316386.1 [sequence] [blastp]
XP_024465358.1 [sequence] [blastp]
XP_024465359.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  mito 3,  chlo 2,  nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_002316386.1)
cyto 4,  chlo 2,  cyto_plas 2,  cysk 1,  cysk_nucl 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_024465358.1)
cyto 4,  chlo 2,  cyto_plas 2,  cysk 1,  cysk_nucl 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_024465359.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002316386.1)
scret 8  (predict for XP_024465358.1)
scret 8  (predict for XP_024465359.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7463449

.
ppo-r.4
for
7463449

.
ppo-m.4
for
7463449

.
ppo-u.5
for
7479861

.
gma-u.5
for
100500544

.
gma-u.5
for
100305769

.
mtr-u.5
for
25484933

.
ath-u.5
for
ARA6

.
vvi-u.5
for
100259851

.
sly-u.5
for
101245117

.
osa-u.5
for
4331646

.
osa-u.5
for
4348725

.
zma-u.5
for
100282900

.


Ortholog ID: 8053
Species ath gma gma sly osa osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi bdi nta nta
Symbol ARA6 LOC100500544 LOC100305769 LOC101245117 LOC4348725 LOC4331646 LOC100282900 LOC103841387 LOC100259851 LOC7463449 LOC7479861 LOC25484933 LOC123119169 LOC123098437 LOC123449464 LOC107934553 LOC121207708 LOC106411857 LOC106394494 LOC8085466 LOC102600546 LOC102622088 LOC100822166 LOC100840947 LOC107794083 LOC107823571
Function* Ras-related small GTP-binding family protein ras-related protein RABF1 P-loop NTPase domain superfamily protein ras-related protein RABF1 ras-related protein RABF1 ras-related protein RABF1 uncharacterized LOC100282900 ras-related protein RABF1 ras-related protein RABF1 ras-related protein RABF1 ras-related protein RABF1 ras-related protein RABF1 ras-related protein RABF1 ras-related protein RABF1 ras-related protein RABF1 ras-related protein RABF1 ras-related protein RABF1 ras-related protein RABF1 ras-related protein RABF1-like ras-related protein RABF1 ras-related protein RABF1 ras-related protein RABF1 ras-related protein RABF1 ras-related protein RABF1 ras-related protein RABF1 ras-related protein RABF1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 5
ath04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 4
gma04144 Endocytosis 3
gma04145 Phagosome 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04144 Endocytosis 2
gma04145 Phagosome 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 5
osa04145 Phagosome 3
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 4
osa04130 SNARE interactions in vesicular transport 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 3
bra00190 Oxidative phosphorylation 2
bra04148 Efferocytosis 2
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo04144 Endocytosis 3
ppo04145 Phagosome 3
ppo04130 SNARE interactions in vesicular transport 2
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr04141 Protein processing in endoplasmic reticulum 4
mtr04144 Endocytosis 2
mtr04145 Phagosome 2
mtr04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae04144 Endocytosis 2
tae04145 Phagosome 2
tae04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 3
tae04144 Endocytosis 3
tae04145 Phagosome 3
tae04148 Efferocytosis 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 4
hvu04145 Phagosome 3
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu04712 Circadian rhythm - plant 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 12
ghi04130 SNARE interactions in vesicular transport 3
ghi03272 Virion - Hepatitis viruses 2
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 7
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna04144 Endocytosis 4
bna04145 Phagosome 2
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 6
bna04120 Ubiquitin mediated proteolysis 4
bna04144 Endocytosis 3
bna00270 Cysteine and methionine metabolism 2
bna04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
sot04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04145 Phagosome 2
cit03060 Protein export 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 6
bdi04145 Phagosome 5
bdi04148 Efferocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 9
nta00061 Fatty acid biosynthesis 2
nta00280 Valine, leucine and isoleucine degradation 2
nta01212 Fatty acid metabolism 2
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 10
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta04145 Phagosome 2
nta04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824649 100500544 100305769 101245117 4348725 4331646 100282900 103841387 100259851 7463449 7479861 25484933 123119169 123098437 123449464 107934553 121207708 106411857 106394494 8085466 102600546 102622088 100822166 100840947 107794083 107823571
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