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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7463454   U11/U12 small nuclear ribonucleoprotein 31 kDa protein 
 ppo-r.4   7463454   U11/U12 small nuclear ribonucleoprotein 31 kDa protein 
 ppo-m.4   7463454   U11/U12 small nuclear ribonucleoprotein 31 kDa protein 
 gma-u.5   100814914   U11/U12 small nuclear ribonucleoprotein 31 kDa protein 
 mtr-u.5   112420380   U11/U12 small nuclear ribonucleoprotein 31 kDa protein 
 vvi-u.5   100251234   zinc finger CCHC-type and RNA-binding motif-containing protein 1-like 
 sly-u.5   101266891   U11/U12 small nuclear ribonucleoprotein 31 kDa protein 
 osa-u.5   4347779   U11/U12 small nuclear ribonucleoprotein 31 kDa protein 
 zma-u.5   100283922   RNA binding protein 
 zma-u.5   100285334   uncharacterized LOC100285334 

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Top 50 coexpressed genes to 7463454 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7463454 (ppo-u.5 coexpression data)

CoexMap"7463454"


ppoLOC7463454 | Entrez gene ID : 7463454    
Species ppo gma mtr vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae ath bna ghi
Paralog 3 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (213 genes)  IEA  
GO CC
GO:0005689 [list] [network] U12-type spliceosomal complex  (24 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
Protein XP_052311987.1 [sequence] [blastp]
XP_052311988.1 [sequence] [blastp]
XP_052311989.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_052311987.1)
nucl 9  (predict for XP_052311988.1)
nucl 9  (predict for XP_052311989.1)
Subcellular
localization
TargetP
other 7  (predict for XP_052311987.1)
other 7  (predict for XP_052311988.1)
other 7  (predict for XP_052311989.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7463454

.
ppo-r.4
for
7463454

.
ppo-m.4
for
7463454

.
gma-u.5
for
100814914

.
mtr-u.5
for
112420380

.
vvi-u.5
for
100251234

.
sly-u.5
for
101266891

.
osa-u.5
for
4347779

.
zma-u.5
for
100283922

.
zma-u.5
for
100285334

.


Ortholog ID: 10751
Species gma sly osa zma zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol LOC100814914 LOC101266891 LOC4347779 LOC100283922 LOC100285334 LOC103870471 LOC100251234 LOC7463454 LOC112420380 LOC123113008 LOC123122519 LOC123451860 LOC107957404 LOC107904156 LOC111211133 LOC106452678 LOC8074163 LOC102603802 LOC102617595 LOC100826392 LOC107763204 LOC107786071
Function* U11/U12 small nuclear ribonucleoprotein 31 kDa protein U11/U12 small nuclear ribonucleoprotein 31 kDa protein U11/U12 small nuclear ribonucleoprotein 31 kDa protein RNA binding protein uncharacterized LOC100285334 U11/U12 small nuclear ribonucleoprotein 31 kDa protein zinc finger CCHC-type and RNA-binding motif-containing protein 1-like U11/U12 small nuclear ribonucleoprotein 31 kDa protein U11/U12 small nuclear ribonucleoprotein 31 kDa protein U11/U12 small nuclear ribonucleoprotein 31 kDa protein U11/U12 small nuclear ribonucleoprotein 31 kDa protein U11/U12 small nuclear ribonucleoprotein 31 kDa protein U11/U12 small nuclear ribonucleoprotein 31 kDa protein U11/U12 small nuclear ribonucleoprotein 31 kDa protein U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like U11/U12 small nuclear ribonucleoprotein 31 kDa protein U11/U12 small nuclear ribonucleoprotein 31 kDa protein U11/U12 small nuclear ribonucleoprotein 31 kDa protein U11/U12 small nuclear ribonucleoprotein 31 kDa protein U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma00730 Thiamine metabolism 2
gma01240 Biosynthesis of cofactors 2
gma04122 Sulfur relay system 2
gma00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae04145 Phagosome 3
tae04148 Efferocytosis 3
tae04517 IgSF CAM signaling 3
tae04518 Integrin signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
nta04120 Ubiquitin mediated proteolysis 4
nta04141 Protein processing in endoplasmic reticulum 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100814914 101266891 4347779 100283922 100285334 103870471 100251234 7463454 112420380 123113008 123122519 123451860 107957404 107904156 111211133 106452678 8074163 102603802 102617595 100826392 107763204 107786071
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