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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7464723   uncharacterized LOC7464723 
 ppo-r.4   7464723   uncharacterized LOC7464723 
 ppo-m.4   7464723   uncharacterized LOC7464723 
 gma-u.5   100811097   28S ribosomal protein S29, mitochondrial-like 
 gma-u.5   100786442   uncharacterized LOC100786442 
 mtr-u.5   11409257   28S ribosomal protein S29, mitochondrial 
 ath-u.5   AT1G16870   mitochondrial 28S ribosomal protein S29-like protein 
 vvi-u.5   100262146   mitochondrial 28S ribosomal protein S29-like 
 sly-u.5   101249096   uncharacterized LOC101249096 
 osa-u.5   4342672   uncharacterized LOC4342672 
 zma-u.5   100384409   mitochondrial 28S ribosomal protein S29-related 

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Top 50 coexpressed genes to 7464723 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7464723 (ppo-u.5 coexpression data)

CoexMap"7464723"


ppoLOC7464723 | Entrez gene ID : 7464723    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03010 [list] [network] Ribosome (698 genes)
GO BP
GO CC
GO:0005763 [list] [network] mitochondrial small ribosomal subunit  (9 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
Protein XP_006376551.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_006376551.2)
Subcellular
localization
TargetP
chlo 5,  mito 3  (predict for XP_006376551.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7464723

.
ppo-r.4
for
7464723

.
ppo-m.4
for
7464723

.
gma-u.5
for
100811097

.
gma-u.5
for
100786442

.
mtr-u.5
for
11409257

.
ath-u.5
for
AT1G16870

.
vvi-u.5
for
100262146

.
sly-u.5
for
101249096

.
osa-u.5
for
4342672

.
zma-u.5
for
100384409

.


Ortholog ID: 9780
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G16870 LOC100786442 LOC100811097 LOC101249096 LOC4342672 LOC100384409 LOC103872472 LOC100262146 LOC7464723 LOC11409257 LOC123121668 LOC123181097 LOC123431389 LOC107933803 LOC107893660 LOC106365577 LOC106346742 CHLRE_03g176700v5 LOC8078405 LOC102600589 LOC102622498 LOC100839328 LOC107829272 LOC107817401
Function* mitochondrial 28S ribosomal protein S29-like protein uncharacterized LOC100786442 28S ribosomal protein S29, mitochondrial-like uncharacterized LOC101249096 uncharacterized LOC4342672 mitochondrial 28S ribosomal protein S29-related uncharacterized LOC103872472 mitochondrial 28S ribosomal protein S29-like uncharacterized LOC7464723 28S ribosomal protein S29, mitochondrial uncharacterized LOC123121668 uncharacterized LOC123181097 uncharacterized LOC123431389 28S ribosomal protein S29, mitochondrial 28S ribosomal protein S29, mitochondrial uncharacterized LOC106365577 uncharacterized LOC106346742 uncharacterized protein uncharacterized LOC8078405 uncharacterized LOC102600589 uncharacterized LOC102622498 uncharacterized LOC100839328 uncharacterized LOC107829272 uncharacterized LOC107817401
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
gma03010 Ribosome 2
gma03018 RNA degradation 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma03040 Spliceosome 3
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly00250 Alanine, aspartate and glutamate metabolism 2
sly00230 Purine metabolism 2
sly01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 3
zma03018 RNA degradation 3
zma04626 Plant-pathogen interaction 3
zma00300 Lysine biosynthesis 2
zma00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 3
bra03010 Ribosome 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
mtr03010 Ribosome 2
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
tae00230 Purine metabolism 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae01232 Nucleotide metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae04626 Plant-pathogen interaction 3
tae00230 Purine metabolism 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
ghi00300 Lysine biosynthesis 2
ghi00470 D-Amino acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
ghi00300 Lysine biosynthesis 2
ghi00470 D-Amino acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi04626 Plant-pathogen interaction 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00240 Pyrimidine metabolism 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838258 100786442 100811097 101249096 4342672 100384409 103872472 100262146 7464723 11409257 123121668 123181097 123431389 107933803 107893660 106365577 106346742 5728844 8078405 102600589 102622498 100839328 107829272 107817401
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