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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7465317   RING-H2 finger protein ATL20 
 ppo-r.4   7465317   RING-H2 finger protein ATL20 
 ppo-m.4   7465317   RING-H2 finger protein ATL20 
 ppo-u.5   7467090   RING-H2 finger protein ATL20 
 gma-u.5   102661206   putative RING-H2 finger protein ATL21B 
 gma-u.5   100818969   RING-H2 finger protein ATL20-like 
 gma-u.5   100810240   RING-H2 finger protein ATL20 
 mtr-u.5   11421651   putative RING-H2 finger protein ATL21B 
 mtr-u.5   25502189   RING-H2 finger protein ATL22 
 mtr-u.5   25502192   putative RING-H2 finger protein ATL21A 
 ath-u.5   AT5G53110   RING/U-box superfamily protein 
 vvi-u.5   100262465   putative RING-H2 finger protein ATL21A 
 vvi-u.5   100244486   RING-H2 finger protein ATL20 
 sly-u.5   101256794   putative RING-H2 finger protein ATL21A 
 sly-u.5   101253066   RING-H2 finger protein ATL22 

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Top 50 coexpressed genes to 7465317 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7465317 (ppo-u.5 coexpression data)

CoexMap"7465317"


ppoLOC7465317 | Entrez gene ID : 7465317    
Species ppo gma mtr ath vvi sly sbi nta bra osa cre cit hvu bdi sot zma tae bna ghi
Paralog 4 3 3 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0030247 [list] [network] polysaccharide binding  (97 genes)  IEA  
Protein XP_002304557.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  extr 3,  vacu 2,  nucl 1,  cyto 1,  golg 1,  cyto_nucl 1  (predict for XP_002304557.1)
Subcellular
localization
TargetP
scret 8  (predict for XP_002304557.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7465317

.
ppo-r.4
for
7465317

.
ppo-m.4
for
7465317

.
ppo-u.5
for
7467090

.
gma-u.5
for
102661206

.
gma-u.5
for
100818969

.
gma-u.5
for
100810240

.
mtr-u.5
for
11421651

.
mtr-u.5
for
25502189

.
mtr-u.5
for
25502192

.
ath-u.5
for
AT5G53110

.
vvi-u.5
for
100262465

.
vvi-u.5
for
100244486

.
sly-u.5
for
101256794

.
sly-u.5
for
101253066

.


Ortholog ID: 5392
Species ath gma gma sly sly bra bra vvi vvi ppo mtr mtr ghi ghi bna sot sot nta nta
Symbol AT5G53110 LOC100810240 LOC100818969 LOC101256794 LOC101253066 LOC103852056 LOC103844790 LOC100244486 LOC100262465 LOC7467090 LOC11421651 LOC25502189 LOC107950088 LOC107923725 LOC106413901 LOC102603520 LOC102588204 LOC107760680 LOC107771750
Function* RING/U-box superfamily protein RING-H2 finger protein ATL20 RING-H2 finger protein ATL20-like putative RING-H2 finger protein ATL21A RING-H2 finger protein ATL22 RING-H2 finger protein ATL20 RING-H2 finger protein ATL20 RING-H2 finger protein ATL20 putative RING-H2 finger protein ATL21A RING-H2 finger protein ATL20 putative RING-H2 finger protein ATL21B RING-H2 finger protein ATL22 RING-H2 finger protein ATL20 putative RING-H2 finger protein ATL21A RING-H2 finger protein ATL20 RING-H2 finger protein ATL22-like putative RING-H2 finger protein ATL21A RING-H2 finger protein ATL20 putative RING-H2 finger protein ATL21A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 4
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00330 Arginine and proline metabolism 2
gma00360 Phenylalanine metabolism 2
gma00380 Tryptophan metabolism 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra02010 ABC transporters 3
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 6
ghi01230 Biosynthesis of amino acids 6
ghi00270 Cysteine and methionine metabolism 3
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 8
sot00941 Flavonoid biosynthesis 5
sot00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 5
sot00360 Phenylalanine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835391 100810240 100818969 101256794 101253066 103852056 103844790 100244486 100262465 7467090 11421651 25502189 107950088 107923725 106413901 102603520 102588204 107760680 107771750
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