ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7465802	uncharacterized LOC7465802
ppo-r.4	7465802	uncharacterized LOC7465802
ppo-u.5	18104859	uncharacterized LOC18104859
gma-u.5	100785257	uncharacterized LOC100785257
gma-u.5	100789840	uncharacterized LOC100789840
mtr-u.5	11415277	uncharacterized LOC11415277
mtr-u.5	11413050	uncharacterized LOC11413050
mtr-u.5	11429074	uncharacterized LOC11429074
ath-u.5	AT4G12240	zinc finger (C2H2 type) family protein
ath-u.5	AT5G52010	C2H2-like zinc finger protein
bra-r.6	103858624	uncharacterized LOC103858624
bra-r.6	103857156	uncharacterized LOC103857156
vvi-u.5	100261883	uncharacterized LOC100261883
vvi-u.5	100248940	uncharacterized LOC100248940
ghi-r.1	107934202	uncharacterized LOC107934202
ghi-r.1	107957871	uncharacterized LOC107957871
ghi-r.1	121230286	uncharacterized LOC121230286
bna-r.1	106388579	uncharacterized LOC106388579
bna-r.1	106345903	uncharacterized LOC106345903
bna-r.1	111212087	uncharacterized LOC111212087
cit-r.1	102628830	uncharacterized LOC102628830
cit-r.1	102626050	uncharacterized LOC102626050
cit-r.1	102626968	uncharacterized LOC102626968
sly-u.5	101253851	uncharacterized LOC101253851
sot-r.1	102600262	uncharacterized LOC102600262
nta-r.1	107759456	uncharacterized LOC107759456
nta-r.1	107772620	uncharacterized LOC107772620
nta-r.1	107804708	uncharacterized LOC107804708
osa-u.5	4340243	uncharacterized LOC4340243
osa-u.5	4336084	uncharacterized LOC4336084
zma-u.5	100284277	zinc finger, C2H2 type family protein
tae-r.2	123162483	uncharacterized LOC123162483
tae-r.2	123170148	uncharacterized LOC123170148
tae-r.2	123041497	uncharacterized LOC123041497
hvu-r.1	123408040	uncharacterized LOC123408040
sbi-r.1	8070886	uncharacterized LOC8070886
bdi-r.1	100821186	uncharacterized LOC100821186
bdi-r.1	100824659	uncharacterized LOC100824659
cre-r.1	CHLRE_11g481115v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0004540 [list] [network] RNA nuclease activity

(164 genes)

IEA

Protein

XP_002304433.4 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, extr 1, pero 1, nucl 1, mito 1, cyto_pero 1

(predict for XP_002304433.4)

Subcellular
localization
TargetP

mito 5

(predict for XP_002304433.4)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7465802	ppo-r.4 for 7465802	ppo-u.5 for 18104859	gma-u.5 for 100785257	gma-u.5 for 100789840	mtr-u.5 for 11415277	mtr-u.5 for 11413050	mtr-u.5 for 11429074	ath-u.5 for AT4G12240	ath-u.5 for AT5G52010	bra-r.6 for 103858624	bra-r.6 for 103857156	vvi-u.5 for 100261883	vvi-u.5 for 100248940	ghi-r.1 for 107934202	ghi-r.1 for 107957871	ghi-r.1 for 121230286	bna-r.1 for 106388579	bna-r.1 for 106345903	bna-r.1 for 111212087	cit-r.1 for 102628830	cit-r.1 for 102626050	cit-r.1 for 102626968	sly-u.5 for 101253851	sot-r.1 for 102600262	nta-r.1 for 107759456	nta-r.1 for 107772620	nta-r.1 for 107804708	osa-u.5 for 4340243	osa-u.5 for 4336084	zma-u.5 for 100284277	tae-r.2 for 123162483	tae-r.2 for 123170148	tae-r.2 for 123041497	hvu-r.1 for 123408040	sbi-r.1 for 8070886	bdi-r.1 for 100821186	bdi-r.1 for 100824659	cre-r.1 for CHLRE_11g481115v5

Ortholog

Ortholog ID: 3956

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC7465802

uncharacterized LOC18104859

uncharacterized LOC100785257

uncharacterized LOC100789840

uncharacterized LOC11415277

uncharacterized LOC11413050

uncharacterized LOC11429074

zinc finger (C2H2 type) family protein

C2H2-like zinc finger protein

uncharacterized LOC103858624

uncharacterized LOC103857156

uncharacterized LOC100261883

uncharacterized LOC100248940

uncharacterized LOC107957871

uncharacterized LOC121230286

uncharacterized LOC107913309

uncharacterized LOC106388579

uncharacterized LOC111212087

uncharacterized LOC106414984

uncharacterized LOC102628830

uncharacterized LOC102626050

uncharacterized LOC102626968

uncharacterized LOC101253851

uncharacterized LOC102600262

uncharacterized LOC107759456

uncharacterized LOC107804708

putative phospholipid-transporting ATPase 4

uncharacterized LOC4340243

uncharacterized LOC4336084

zinc finger, C2H2 type family protein

uncharacterized LOC123162483

uncharacterized LOC123170148

uncharacterized LOC123149658

uncharacterized LOC123408040

uncharacterized LOC8070886

uncharacterized LOC100821186

uncharacterized LOC100824659

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	3
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	2
ghi00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03015	mRNA surveillance pathway	6
bna03250	Viral life cycle - HIV-1	6
bna04820	Cytoskeleton in muscle cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03015	mRNA surveillance pathway	6
bna03250	Viral life cycle - HIV-1	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	4
cit03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3
sly03013	Nucleocytoplasmic transport	2
sly03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	5

Expression

Expression pattern

Entrez Gene ID^*

7465802

18104859

100785257

100789840

11415277

11413050

11429074

826832

835276

103858624

103857156

100261883

100248940

107957871

121230286

107913309

106388579

111212087

106414984

102628830

102626050

102626968

101253851

102600262

107759456

107804708

107812281

4340243

4336084

100284277

123162483

123170148

123149658

123408040

8070886

100821186

100824659

66055356

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7465802 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7465802 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	3	2	2	2	3	3	3	1	1	3	2	1	3	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7465802 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7465802 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**