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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7466293   actin-related protein 2/3 complex subunit 1B 
 ppo-r.4   7466293   actin-related protein 2/3 complex subunit 1B 
 ppo-m.4   7466293   actin-related protein 2/3 complex subunit 1B 
 gma-u.5   100789138   actin-related protein 2/3 complex subunit 1-like 
 gma-u.5   100778212   actin-related protein 2/3 complex subunit 1B 
 gma-u.5   100804478   actin-related protein 2/3 complex subunit 1B 
 mtr-u.5   11443510   actin-related protein 2/3 complex subunit 1B 
 ath-u.5   ARPC1A   actin-related protein C1A 
 ath-u.5   ARPC1B   actin-related protein C1B 
 vvi-u.5   100257410   actin-related protein 2/3 complex subunit 1A 
 sly-u.5   101245162   actin-related protein 2/3 complex subunit 1A 
 osa-u.5   4331146   actin-related protein 2/3 complex subunit 1B 
 zma-u.5   100282667   actin-related protein 2/3 complex subunit 1B 
 zma-u.5   100384689   Actin-related protein 2/3 complex subunit 1A 

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Top 50 coexpressed genes to 7466293 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7466293 (ppo-u.5 coexpression data)

CoexMap"7466293"


ppoLOC7466293 | Entrez gene ID : 7466293    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 3 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop04144 [list] [network] Endocytosis (195 genes)
pop04517 [list] [network] IgSF CAM signaling (72 genes)
pop05100 [list] [network] Bacterial invasion of epithelial cells (35 genes)
GO BP
GO:0034314 [list] [network] Arp2/3 complex-mediated actin nucleation  (13 genes)  IEA  
GO CC
GO:0005885 [list] [network] Arp2/3 protein complex  (13 genes)  IEA  
GO:0015629 [list] [network] actin cytoskeleton  (71 genes)  IEA  
GO MF
GO:0051015 [list] [network] actin filament binding  (88 genes)  IEA  
Protein XP_002321070.1 [sequence] [blastp]
XP_024441451.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cysk 1,  cyto 1,  extr 1,  cysk_plas 1  (predict for XP_002321070.1)
nucl 5,  cysk 2,  cyto 1,  cysk_plas 1  (predict for XP_024441451.1)
Subcellular
localization
TargetP
scret 5,  other 4  (predict for XP_002321070.1)
scret 5,  other 4  (predict for XP_024441451.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7466293

.
ppo-r.4
for
7466293

.
ppo-m.4
for
7466293

.
gma-u.5
for
100789138

.
gma-u.5
for
100778212

.
gma-u.5
for
100804478

.
mtr-u.5
for
11443510

.
ath-u.5
for
ARPC1A

.
ath-u.5
for
ARPC1B

.
vvi-u.5
for
100257410

.
sly-u.5
for
101245162

.
osa-u.5
for
4331146

.
zma-u.5
for
100282667

.
zma-u.5
for
100384689

.


Ortholog ID: 5692
Species ath ath gma gma sly osa zma zma bra vvi ppo mtr tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol ARPC1B ARPC1A LOC100804478 LOC100789138 LOC101245162 LOC4331146 LOC100282667 LOC100384689 LOC103867929 LOC100257410 LOC7466293 LOC11443510 LOC123139870 LOC123402738 LOC107896882 LOC107914491 LOC106387847 LOC106442649 CHLRE_16g648100v5 LOC8056448 LOC102582777 LOC102629918 LOC100833080 LOC107832594 LOC107784652
Function* actin-related protein C1B actin-related protein C1A actin-related protein 2/3 complex subunit 1B actin-related protein 2/3 complex subunit 1-like actin-related protein 2/3 complex subunit 1A actin-related protein 2/3 complex subunit 1B actin-related protein 2/3 complex subunit 1B Actin-related protein 2/3 complex subunit 1A actin-related protein 2/3 complex subunit 1A actin-related protein 2/3 complex subunit 1A actin-related protein 2/3 complex subunit 1B actin-related protein 2/3 complex subunit 1B actin-related protein 2/3 complex subunit 1B actin-related protein 2/3 complex subunit 1B-like actin-related protein 2/3 complex subunit 1A actin-related protein 2/3 complex subunit 1A actin-related protein 2/3 complex subunit 1A-like actin-related protein 2/3 complex subunit 1A uncharacterized protein actin-related protein 2/3 complex subunit 1B actin-related protein 2/3 complex subunit 1A-like actin-related protein 2/3 complex subunit 1A actin-related protein 2/3 complex subunit 1B actin-related protein 2/3 complex subunit 1A-like actin-related protein 2/3 complex subunit 1A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 6
ath04144 Endocytosis 2
ath04517 IgSF CAM signaling 2
ath05100 Bacterial invasion of epithelial cells 2
ath00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
ath04144 Endocytosis 2
ath04517 IgSF CAM signaling 2
ath05100 Bacterial invasion of epithelial cells 2
ath00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 5
gma04517 IgSF CAM signaling 5
gma05100 Bacterial invasion of epithelial cells 5
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
gma04517 IgSF CAM signaling 3
gma05100 Bacterial invasion of epithelial cells 3
gma00561 Glycerolipid metabolism 2
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
sly00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04130 SNARE interactions in vesicular transport 4
osa04144 Endocytosis 3
osa04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 2
zma03420 Nucleotide excision repair 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 6
vvi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo04517 IgSF CAM signaling 2
ppo05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr03060 Protein export 2
mtr04141 Protein processing in endoplasmic reticulum 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi04517 IgSF CAM signaling 2
ghi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi04517 IgSF CAM signaling 2
ghi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 4
bna04517 IgSF CAM signaling 4
bna05100 Bacterial invasion of epithelial cells 4
bna00760 Nicotinate and nicotinamide metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 4
bna04517 IgSF CAM signaling 4
bna05100 Bacterial invasion of epithelial cells 4
bna00760 Nicotinate and nicotinamide metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 3
sbi03420 Nucleotide excision repair 3
sbi03022 Basal transcription factors 2
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
bdi04517 IgSF CAM signaling 2
bdi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta04517 IgSF CAM signaling 2
nta05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta04517 IgSF CAM signaling 2
nta05100 Bacterial invasion of epithelial cells 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817687 817641 100804478 100789138 101245162 4331146 100282667 100384689 103867929 100257410 7466293 11443510 123139870 123402738 107896882 107914491 106387847 106442649 5723824 8056448 102582777 102629918 100833080 107832594 107784652
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