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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7466300   uncharacterized LOC7466300 
 ppo-r.4   7466300   uncharacterized LOC7466300 
 gma-u.5   100809322   50S ribosomal protein L1 
 gma-u.5   100802973   50S ribosomal protein L1 
 mtr-u.5   11408457   50S ribosomal protein L1 
 ath-u.5   AT2G42710   Ribosomal protein L1p/L10e family 
 vvi-u.5   100257519   uncharacterized LOC100257519 
 sly-u.5   101253561   uncharacterized LOC101253561 
 osa-u.5   4341246   uncharacterized LOC4341246 
 zma-u.5   100282763   Ribosomal protein L1p/L10e family-like 

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Top 50 coexpressed genes to 7466300 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7466300 (ppo-u.5 coexpression data)

CoexMap"7466300"


ppoLOC7466300 | Entrez gene ID : 7466300    
Species ppo gma mtr ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006412 [list] [network] translation  (598 genes)  IEA  
GO CC
GO:0015934 [list] [network] large ribosomal subunit  (216 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
Protein XP_024441623.1 [sequence] [blastp]
XP_024441624.1 [sequence] [blastp]
XP_024441625.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 2,  cyto_mito 1,  cyto 1  (predict for XP_024441623.1)
chlo 5,  mito 2,  cyto_mito 1,  cyto 1  (predict for XP_024441624.1)
chlo 7,  cyto 2  (predict for XP_024441625.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_024441623.1)
mito 7  (predict for XP_024441624.1)
mito 7  (predict for XP_024441625.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7466300

.
ppo-r.4
for
7466300

.
gma-u.5
for
100809322

.
gma-u.5
for
100802973

.
mtr-u.5
for
11408457

.
ath-u.5
for
AT2G42710

.
vvi-u.5
for
100257519

.
sly-u.5
for
101253561

.
osa-u.5
for
4341246

.
zma-u.5
for
100282763

.


Ortholog ID: 10044
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT2G42710 LOC100809322 LOC100802973 LOC101253561 LOC4341246 LOC100282763 LOC103866668 LOC100257519 LOC7466300 LOC11408457 LOC123164955 LOC123156903 LOC123408416 LOC107886943 LOC107908840 LOC106361773 LOC106377407 LOC8061930 LOC102583569 LOC102627029 LOC100845571 LOC107778475 LOC107782852
Function* Ribosomal protein L1p/L10e family 50S ribosomal protein L1 50S ribosomal protein L1 uncharacterized LOC101253561 uncharacterized LOC4341246 Ribosomal protein L1p/L10e family-like 50S ribosomal protein L1 uncharacterized LOC100257519 uncharacterized LOC7466300 50S ribosomal protein L1 50S ribosomal protein L1 50S ribosomal protein L1 50S ribosomal protein L1 50S ribosomal protein L1 50S ribosomal protein L1 50S ribosomal protein L1-like 50S ribosomal protein L1 50S ribosomal protein L1 50S ribosomal protein L1 uncharacterized LOC102627029 50S ribosomal protein L1 uncharacterized LOC107778475 uncharacterized LOC107782852
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03008 Ribosome biogenesis in eukaryotes 2
gma00230 Purine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
bra04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 9
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 3
sot03008 Ribosome biogenesis in eukaryotes 3
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 8
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 3
bdi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818871 100809322 100802973 101253561 4341246 100282763 103866668 100257519 7466300 11408457 123164955 123156903 123408416 107886943 107908840 106361773 106377407 8061930 102583569 102627029 100845571 107778475 107782852
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