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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7466844   probable polygalacturonase 
 ppo-u.5   7466741   probable polygalacturonase 
 gma-u.5   100814190   probable polygalacturonase 
 mtr-u.5   11424001   probable polygalacturonase 
 ath-u.5   AT4G33440   Pectin lyase-like superfamily protein 
 vvi-u.5   100252291   probable polygalacturonase 
 sly-u.5   101263717   probable polygalacturonase 
 osa-u.5   4344456   probable polygalacturonase 
 zma-u.5   100281863   polygalacturonase 

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Top 50 coexpressed genes to 7466844 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7466844 (ppo-m.4 coexpression data)

CoexMap"7466844"


ppoLOC7466844 | Entrez gene ID : 7466844    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (863 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (77 genes)  IEA  
Protein XP_002307030.2 [sequence] [blastp]
Subcellular
localization
wolf
extr 4,  chlo 3,  nucl 1,  chlo_mito 1  (predict for XP_002307030.2)
Subcellular
localization
TargetP
other 8  (predict for XP_002307030.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7466844

.
ppo-u.5
for
7466741

.
gma-u.5
for
100814190

.
mtr-u.5
for
11424001

.
ath-u.5
for
AT4G33440

.
vvi-u.5
for
100252291

.
sly-u.5
for
101263717

.
osa-u.5
for
4344456

.
zma-u.5
for
100281863

.


Ortholog ID: 7691
Species ath gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit cit bdi nta nta
Symbol AT4G33440 LOC100814190 LOC101263717 LOC4344456 LOC100281863 LOC103847224 LOC103862238 LOC100252291 LOC7466741 LOC11424001 LOC123160835 LOC123168785 LOC123412372 LOC107890690 LOC107935801 LOC106407515 LOC106438527 LOC8064349 LOC102578193 LOC102611232 LOC102620848 LOC100839827 LOC107832369 LOC107830244
Function* Pectin lyase-like superfamily protein probable polygalacturonase probable polygalacturonase probable polygalacturonase polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase putative polygalacturonase putative polygalacturonase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00920 Sulfur metabolism 4
sly01320 Sulfur cycle 4
sly01200 Carbon metabolism 4
sly00520 Amino sugar and nucleotide sugar metabolism 3
sly00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 2
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 4
tae01250 Biosynthesis of nucleotide sugars 4
tae04146 Peroxisome 3
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 4
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 3
sbi01200 Carbon metabolism 2
sbi00561 Glycerolipid metabolism 2
sbi03272 Virion - Hepatitis viruses 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00380 Tryptophan metabolism 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 4
nta04626 Plant-pathogen interaction 2
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
nta00230 Purine metabolism 2
nta00232 Caffeine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829481 100814190 101263717 4344456 100281863 103847224 103862238 100252291 7466741 11424001 123160835 123168785 123412372 107890690 107935801 106407515 106438527 8064349 102578193 102611232 102620848 100839827 107832369 107830244
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