ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7467177	VQ motif-containing protein 9
ppo-r.4	7467177	VQ motif-containing protein 9
ppo-m.4	7467177	VQ motif-containing protein 9
ppo-u.5	7486580	VQ motif-containing protein 9
ppo-u.5	18094168	protein HAIKU1
ppo-u.5	18096971	protein HAIKU1
gma-u.5	100817760	protein HAIKU1
gma-u.5	100817229	protein HAIKU1
gma-u.5	100776990	protein HAIKU1
mtr-u.5	11425587	VQ motif-containing protein 9
mtr-u.5	11409848	protein HAIKU1
ath-u.5	IKU1	VQ motif-containing protein
ath-u.5	AT5G46780	VQ motif-containing protein
ath-u.5	AT1G32610	hydroxyproline-rich glycoprotein family protein
bra-r.6	103827707	protein HAIKU1
bra-r.6	103853123	VQ motif-containing protein 9-like
bra-r.6	103832314	VQ motif-containing protein 9
vvi-u.5	100248947	protein HAIKU1
vvi-u.5	100257517	VQ motif-containing protein 9
ghi-r.1	107939767	protein HAIKU1
ghi-r.1	107950135	protein HAIKU1
ghi-r.1	107957779	VQ motif-containing protein 9
bna-r.1	111211092	protein HAIKU1
bna-r.1	125600513	protein HAIKU1-like
bna-r.1	125609318	protein HAIKU1-like
cit-r.1	102621852	VQ motif-containing protein 9
sly-u.5	101266834	protein HAIKU1
sly-u.5	101262412	VQ motif-containing protein 9
sot-r.1	102583040	VQ motif-containing protein 9
sot-r.1	102580914	protein HAIKU1-like
sot-r.1	102597322	protein HAIKU1
nta-r.1	107777575	VQ motif-containing protein 9
nta-r.1	107781634	protein HAIKU1
nta-r.1	107787507	protein HAIKU1-like
osa-u.5	9267313	vegetative cell wall protein gp1
osa-u.5	4349496	protein HAIKU1-like
zma-u.5	100216927	VQ motif-containing protein 9
zma-u.5	103631839	leucine-rich repeat extensin-like protein 3
zma-u.5	100272484	Protein HAIKU1
tae-r.2	123088099	pollen-specific leucine-rich repeat extensin-like protein 1
tae-r.2	123050411	protein HAIKU1
tae-r.2	123089322	pollen-specific leucine-rich repeat extensin-like protein 3
hvu-r.1	123449670	VQ motif-containing protein 9-like
hvu-r.1	123436412	VQ motif-containing protein 9-like
sbi-r.1	8055132	protein HAIKU1
sbi-r.1	8081916	vegetative cell wall protein gp1
bdi-r.1	100843936	vegetative cell wall protein gp1
bdi-r.1	100824304	VQ motif-containing protein 9

Top 50 coexpressed genes to 7467177 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7467177 (ppo-u.5 coexpression data)

CoexMap""

[Cytoscape]

Annotation

functional annotation

Function

VQ motif-containing protein 9

KEGG

GO BP

GO CC

GO MF

Protein

XP_002302309.1 [sequence] [blastp]
XP_024451942.1 [sequence] [blastp]
XP_024451943.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, chlo 1, extr 1, pero 1	(predict for XP_002302309.1)
nucl 8, chlo 1, extr 1, pero 1	(predict for XP_024451942.1)
nucl 8, chlo 1, extr 1, pero 1	(predict for XP_024451943.1)

Subcellular
localization
TargetP

other 7, chlo 4	(predict for XP_002302309.1)
other 7, chlo 4	(predict for XP_024451942.1)
other 7, chlo 4	(predict for XP_024451943.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7467177	ppo-r.4 for 7467177	ppo-m.4 for 7467177	ppo-u.5 for 7486580	ppo-u.5 for 18094168	ppo-u.5 for 18096971	gma-u.5 for 100817760	gma-u.5 for 100817229	gma-u.5 for 100776990	mtr-u.5 for 11425587	mtr-u.5 for 11409848	ath-u.5 for IKU1	ath-u.5 for AT5G46780	ath-u.5 for AT1G32610	bra-r.6 for 103827707	bra-r.6 for 103853123	bra-r.6 for 103832314	vvi-u.5 for 100248947	vvi-u.5 for 100257517	ghi-r.1 for 107939767	ghi-r.1 for 107950135	ghi-r.1 for 107957779	bna-r.1 for 111211092	bna-r.1 for 125600513	bna-r.1 for 125609318	cit-r.1 for 102621852	sly-u.5 for 101266834	sly-u.5 for 101262412	sot-r.1 for 102583040	sot-r.1 for 102580914	sot-r.1 for 102597322	nta-r.1 for 107777575	nta-r.1 for 107781634	nta-r.1 for 107787507	osa-u.5 for 9267313	osa-u.5 for 4349496	zma-u.5 for 100216927	zma-u.5 for 103631839	zma-u.5 for 100272484	tae-r.2 for 123088099	tae-r.2 for 123050411	tae-r.2 for 123089322	hvu-r.1 for 123449670	hvu-r.1 for 123436412	sbi-r.1 for 8055132	sbi-r.1 for 8081916	bdi-r.1 for 100843936	bdi-r.1 for 100824304

Please wait a moment.

Ortholog

Ortholog ID: 1377

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

IKU1

Function^*

VQ motif-containing protein 9

protein HAIKU1

VQ motif-containing protein 9

protein HAIKU1

VQ motif-containing protein

VQ motif-containing protein 9-like

protein HAIKU1

VQ motif-containing protein 9

protein HAIKU1

VQ motif-containing protein 9

protein HAIKU1-like

protein HAIKU1

protein HAIKU1-like

VQ motif-containing protein 9

protein HAIKU1

VQ motif-containing protein 9

protein HAIKU1-like

protein HAIKU1

VQ motif-containing protein 9

protein HAIKU1

VQ motif-containing protein 9-like

vegetative cell wall protein gp1

protein HAIKU1-like

VQ motif-containing protein 9

leucine-rich repeat extensin-like protein 3

Protein HAIKU1

VQ motif-containing protein 9

VQ motif-containing protein 9-like

protein HAIKU1

vegetative cell wall protein gp1

VQ motif-containing protein 9

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00062	Fatty acid elongation	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00770	Pantothenate and CoA biosynthesis	2
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	2
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	2
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	2
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2
nta00730	Thiamine metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	2
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03250	Viral life cycle - HIV-1	2
tae03272	Virion - Hepatitis viruses	2
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04626	Plant-pathogen interaction	3
bdi04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

7486580

18094168

18096971

100776990

100808478

102665762

11425587

11409848

818090

834721

844166

103853123

103865437

100248947

100257517

107950135

107957779

121230345

125600513

106381835

106366977

102621852

101266834

101262412

102583040

102580914

102597322

107777575

107781634

107825341

9267313

4349496

100216927

103631839

100272484

123126086

123449670

123436412

8055132

8081916

100843936

100824304

The preparation time of this page was 0.2 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	6	3	2	3	3	2	3	3	1	2	3	3	2	3	3	2	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7467177 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7467177 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**