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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7467340   DNA topoisomerase 2 
 ppo-r.4   7467340   DNA topoisomerase 2 
 ppo-u.5   7463842   DNA topoisomerase 2 
 gma-u.5   100796974   DNA topoisomerase 2 
 gma-u.5   100787008   DNA topoisomerase 2 
 mtr-u.5   11405225   DNA topoisomerase 2 
 ath-u.5   TOPII   topoisomerase II 
 vvi-u.5   100253371   DNA topoisomerase 2 
 sly-u.5   101250733   DNA topoisomerase 2 
 osa-u.5   4330426   DNA topoisomerase 2 
 zma-u.5   100193866   DNA topoisomerase 2 
 zma-u.5   100381789   DNA topoisomerase 2 

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Top 50 coexpressed genes to 7467340 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7467340 (ppo-u.5 coexpression data)

CoexMap"7467340"


ppoLOC7467340 | Entrez gene ID : 7467340    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000712 [list] [network] resolution of meiotic recombination intermediates  (9 genes)  IEA  
GO:0006265 [list] [network] DNA topological change  (13 genes)  IEA  
GO:0000819 [list] [network] sister chromatid segregation  (36 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0003918 [list] [network] DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity  (10 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2205 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
Protein XP_002314046.3 [sequence] [blastp]
XP_024464471.2 [sequence] [blastp]
XP_024464472.2 [sequence] [blastp]
XP_024464473.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4  (predict for XP_002314046.3)
nucl 5,  cyto 4  (predict for XP_024464471.2)
nucl 5,  cyto 4  (predict for XP_024464472.2)
nucl 5,  cyto 4  (predict for XP_024464473.2)
Subcellular
localization
TargetP
other 9  (predict for XP_002314046.3)
other 9  (predict for XP_024464471.2)
other 9  (predict for XP_024464472.2)
other 9  (predict for XP_024464473.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7467340

.
ppo-r.4
for
7467340

.
ppo-u.5
for
7463842

.
gma-u.5
for
100796974

.
gma-u.5
for
100787008

.
mtr-u.5
for
11405225

.
ath-u.5
for
TOPII

.
vvi-u.5
for
100253371

.
sly-u.5
for
101250733

.
osa-u.5
for
4330426

.
zma-u.5
for
100193866

.
zma-u.5
for
100381789

.


Ortholog ID: 5527
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr tae hvu ghi ghi bna bna cre sbi sbi sot cit bdi nta nta
Symbol TOPII LOC100796974 LOC100787008 LOC101250733 LOC4330426 LOC100193866 LOC100381789 LOC103853975 LOC100253371 LOC7467340 LOC7463842 LOC11405225 LOC123128092 LOC123401725 LOC121222575 LOC107934399 LOC125610040 LOC106375558 CHLRE_01g009250v5 LOC8085336 LOC8073171 LOC102583378 LOC102610705 LOC100839516 LOC107792933 LOC107825899
Function* topoisomerase II DNA topoisomerase 2 DNA topoisomerase 2 DNA topoisomerase 2 DNA topoisomerase 2 DNA topoisomerase 2 DNA topoisomerase 2 DNA topoisomerase 2 DNA topoisomerase 2 DNA topoisomerase 2 DNA topoisomerase 2 DNA topoisomerase 2 DNA topoisomerase 2 DNA topoisomerase 2 DNA topoisomerase 2 DNA topoisomerase 2 DNA topoisomerase 2-like DNA topoisomerase 2 uncharacterized protein DNA topoisomerase 2 DNA topoisomerase 2 DNA topoisomerase 2 DNA topoisomerase 2 DNA topoisomerase 2 DNA topoisomerase 2-like DNA topoisomerase 2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 2
osa00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 6
zma03430 Mismatch repair 2
zma03030 DNA replication 2
zma03410 Base excision repair 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 6
cit04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821972 100796974 100787008 101250733 4330426 100193866 100381789 103853975 100253371 7467340 7463842 11405225 123128092 123401725 121222575 107934399 125610040 106375558 5725848 8085336 8073171 102583378 102610705 100839516 107792933 107825899
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