ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7491981	copper transporter 5.1
gma-u.5	100815028	copper transporter 5.1
gma-u.5	100808693	copper transporter 2
mtr-u.5	25491540	copper transporter 1
mtr-u.5	11442243	copper transporter 5.1
ath-u.5	COPT6	Ctr copper transporter family
ath-u.5	COPT1	copper transporter 1
vvi-u.5	CTR7	copper transporter
vvi-u.5	CTR3	copper transporter
vvi-u.5	CTR8	copper transporter
sly-u.5	101260645	copper transporter 6-like
sly-u.5	101247486	copper transporter 5
osa-u.5	9269583	copper transporter 6-like
osa-u.5	4347173	copper transporter 5.1-like
osa-u.5	9268111	copper transporter 4-like
zma-u.5	100286321	copper transporter 1
zma-u.5	103632817	copper transporter 5.1
zma-u.5	103643033	copper transporter 5.1

Annotation

functional annotation

KEGG

GO BP

GO:0035434 [list] [network] copper ion transmembrane transport	(7 genes)	IEA
GO:0006878 [list] [network] intracellular copper ion homeostasis	(9 genes)	IEA

GO CC

GO:0005886 [list] [network] plasma membrane

(1125 genes)

IEA

GO MF

GO:0005375 [list] [network] copper ion transmembrane transporter activity

(11 genes)

IEA

Protein

XP_002309099.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, plas 3, cysk 3, cysk_plas 3

(predict for XP_002309099.2)

Subcellular
localization
TargetP

other 9

(predict for XP_002309099.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7491981	gma-u.5 for 100815028	gma-u.5 for 100808693	mtr-u.5 for 25491540	mtr-u.5 for 11442243	ath-u.5 for COPT6	ath-u.5 for COPT1	vvi-u.5 for CTR7	vvi-u.5 for CTR3	vvi-u.5 for CTR8	sly-u.5 for 101260645	sly-u.5 for 101247486	osa-u.5 for 9269583	osa-u.5 for 4347173	osa-u.5 for 9268111	zma-u.5 for 100286321	zma-u.5 for 103632817	zma-u.5 for 103643033

Ortholog

Ortholog ID: 356

Species

ppo

gma

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

LOC7468602

LOC100801036

LOC100805457

COPT2

COPT6

CTR3

Function^*

copper transporter 1

copper transporter 5.1

copper transporter 2

Ctr copper transporter family

copper transporter 1-like

copper transporter

copper transporter 5

copper transporter 6

copper transporter 1

copper transporter 3-like

copper transporter 5

copper transporter 1

copper transporter 6

copper transporter 6-like

uncharacterized LOC107802213

copper transporter 1-like

copper transporter 6-like

copper transporter 1

copper transporter 5.1

copper transporter 6

copper transporter 3

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	7
gma04145	Phagosome	7
gma04142	Lysosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04146	Peroxisome	2
gma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	4
sly00195	Photosynthesis	3
sly00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	5
sot04145	Phagosome	4
sot04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	4
sot00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00270	Cysteine and methionine metabolism	2
zma01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01240	Biosynthesis of cofactors	2
hvu04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

7468602

100801036

100805457

823843

817239

103856641

100244231

107894807

121215527

106443264

106433299

102623246

102619442

101262638

101244986

102606340

102580231

107830556

107802213

4324610

103646489

100286321

123124804

123397297

8075294

100842041

5726486

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7491981 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7491981 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	2	2	2	3	2	3	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7491981 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7491981 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**