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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   COPT6   Ctr copper transporter family 
 ath-r.7   COPT6   Ctr copper transporter family 
 ath-e.2   COPT6   Ctr copper transporter family 
 ath-u.5   COPT2   copper transporter 2 
 ath-u.5   COPT5   copper transporter 5 
 gma-u.5   100805457   copper transporter 5.1 
 gma-u.5   100808693   copper transporter 2 
 vvi-u.5   CTR7   copper transporter 
 vvi-u.5   CTR8   copper transporter 
 vvi-u.5   CTR3   copper transporter 
 ppo-u.5   7468602   copper transporter 1 
 ppo-u.5   18100324   copper transporter 5 
 mtr-u.5   11442243   copper transporter 5.1 
 sly-u.5   101262638   copper transporter 6 
 sly-u.5   101260645   copper transporter 6-like 
 osa-u.5   4324610   copper transporter 1-like 
 osa-u.5   9269583   copper transporter 6-like 
 osa-u.5   4338846   copper transporter 2-like 
 zma-u.5   103632817   copper transporter 5.1 
 zma-u.5   103646489   copper transporter 6-like 

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Top 50 coexpressed genes to COPT6 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to COPT6 (ath-u.5 coexpression data)

CoexMap"817239"


athCOPT6 | Entrez gene ID : 817239      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 5 2 3 2 1 2 3 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0035434 [list] [network] copper ion transmembrane transport  (7 genes)  IGI  
GO CC
GO:0000325 [list] [network] plant-type vacuole  (788 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  IDA  
GO MF
GO:0005375 [list] [network] copper ion transmembrane transporter activity  (15 genes)  IGI  
Protein NP_850091.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  extr 2,  mito 1,  nucl 1,  plas 1,  chlo_mito 1,  cyto_mito 1,  nucl_plas 1  (predict for NP_850091.1)
Subcellular
localization
TargetP
other 8  (predict for NP_850091.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
COPT6
ath-r.7
for
COPT6
ath-e.2
for
COPT6
ath-u.5
for
COPT2
ath-u.5
for
COPT5
gma-u.5
for
100805457
gma-u.5
for
100808693
vvi-u.5
for
CTR7
vvi-u.5
for
CTR8
vvi-u.5
for
CTR3
ppo-u.5
for
7468602
ppo-u.5
for
18100324
mtr-u.5
for
11442243
sly-u.5
for
101262638
sly-u.5
for
101260645
osa-u.5
for
4324610
osa-u.5
for
9269583
osa-u.5
for
4338846
zma-u.5
for
103632817
zma-u.5
for
103646489


Ortholog ID: 356
Species ath ath bra bna bna ghi ghi cit cit gma gma vvi ppo sly sly sot sot nta nta osa zma zma tae hvu sbi bdi cre
Symbol COPT2 COPT6 LOC103856641 LOC106443264 LOC106433299 LOC107894807 LOC121215527 LOC102623246 LOC102619442 LOC100801036 LOC100805457 CTR3 LOC7468602 LOC101262638 LOC101244986 LOC102606340 LOC102580231 LOC107830556 LOC107802213 LOC4324610 LOC103646489 LOC100286321 LOC123124804 LOC123397297 LOC8075294 LOC100842041 CHLRE_05g247050v5
Function* copper transporter 2 Ctr copper transporter family copper transporter 1-like copper transporter 1 copper transporter 3-like copper transporter 5 copper transporter 6 copper transporter 5 copper transporter 1 copper transporter 5.1 copper transporter 5.1 copper transporter copper transporter 1 copper transporter 6 copper transporter 6 copper transporter 6-like copper transporter 6-like copper transporter 6-like uncharacterized LOC107802213 copper transporter 1-like copper transporter 6-like copper transporter 1 copper transporter 5.1 copper transporter 5.1 copper transporter 6 copper transporter 3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 7
gma04145 Phagosome 7
gma04142 Lysosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 4
sly00195 Photosynthesis 3
sly00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 5
sot04145 Phagosome 4
sot04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 4
sot00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
hvu04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823843 817239 103856641 106443264 106433299 107894807 121215527 102623246 102619442 100801036 100805457 100244231 7468602 101262638 101244986 102606340 102580231 107830556 107802213 4324610 103646489 100286321 123124804 123397297 8075294 100842041 5726486
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