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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101262638   copper transporter 6 
 sly-r.6   101262638   copper transporter 6 
 sly-m.5   101262638   copper transporter 6 
 sly-u.5   101247486   copper transporter 5 
 sly-u.5   101244986   copper transporter 6 
 sot-r.1   102593875   copper transporter 5 
 sot-r.1   102606340   copper transporter 6-like 
 nta-r.1   107778500   copper transporter 6-like 
 ath-u.5   COPT6   Ctr copper transporter family 
 ath-u.5   COPT1   copper transporter 1 
 gma-u.5   100815028   copper transporter 5.1 
 gma-u.5   100808693   copper transporter 2 
 bra-r.6   103851365   copper transporter 5-like 
 bra-r.6   103851591   copper transporter 1 
 bra-r.6   103845656   copper transporter 5 
 vvi-u.5   CTR7   copper transporter 
 vvi-u.5   CTR3   copper transporter 
 ppo-u.5   7468602   copper transporter 1 
 mtr-u.5   11427657   copper transporter 6 
 mtr-u.5   11442243   copper transporter 5.1 
 ghi-r.1   121215527   copper transporter 6 
 ghi-r.1   107894807   copper transporter 5 
 ghi-r.1   107886026   copper transporter 6 
 bna-r.1   106425677   copper transporter 5 
 bna-r.1   106420449   copper transporter 3-like 
 bna-r.1   106420268   copper transporter 1-like 
 cit-r.1   102607848   copper transporter 6-like 
 cit-r.1   102619442   copper transporter 1 
 cit-r.1   102619752   copper transporter 1-like 
 osa-u.5   4347173   copper transporter 5.1-like 
 osa-u.5   4338846   copper transporter 2-like 
 zma-u.5   103643033   copper transporter 5.1 
 zma-u.5   100286321   copper transporter 1 
 hvu-r.1   123397297   copper transporter 5.1 
 sbi-r.1   110432205   copper transporter 5.1-like 
 sbi-r.1   8075294   copper transporter 6 
 bdi-r.1   100829673   copper transporter 6 
 cre-r.1   CHLRE_05g247050v5   uncharacterized protein 

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Top 50 coexpressed genes to 101262638 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101262638 (sly-u.5 coexpression data)

CoexMap"101262638"


slyLOC101262638 | Entrez gene ID : 101262638      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma hvu sbi bdi cre tae
Paralog 5 2 1 2 2 3 2 1 2 3 3 3 2 2 1 2 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0035434 [list] [network] copper ion transmembrane transport  (6 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (899 genes)  IEA  
GO MF
GO:0005375 [list] [network] copper ion transmembrane transporter activity  (9 genes)  IEA  
Protein XP_004244480.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  vacu 2,  cyto_nucl 2,  cyto_pero 2,  cyto_plas 2  (predict for XP_004244480.1)
Subcellular
localization
TargetP
other 8  (predict for XP_004244480.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101262638
sly-r.6
for
101262638
sly-m.5
for
101262638
sly-u.5
for
101247486
sly-u.5
for
101244986
sot-r.1
for
102593875
sot-r.1
for
102606340
nta-r.1
for
107778500
ath-u.5
for
COPT6
ath-u.5
for
COPT1
gma-u.5
for
100815028
gma-u.5
for
100808693
bra-r.6
for
103851365
bra-r.6
for
103851591
bra-r.6
for
103845656
vvi-u.5
for
CTR7
vvi-u.5
for
CTR3
ppo-u.5
for
7468602
mtr-u.5
for
11427657
mtr-u.5
for
11442243
ghi-r.1
for
121215527
ghi-r.1
for
107894807
ghi-r.1
for
107886026
bna-r.1
for
106425677
bna-r.1
for
106420449
bna-r.1
for
106420268
cit-r.1
for
102607848
cit-r.1
for
102619442
cit-r.1
for
102619752
osa-u.5
for
4347173
osa-u.5
for
4338846
zma-u.5
for
103643033
zma-u.5
for
100286321
hvu-r.1
for
123397297
sbi-r.1
for
110432205
sbi-r.1
for
8075294
bdi-r.1
for
100829673
cre-r.1
for
CHLRE_05g247050v5


Ortholog ID: 356
Species sly sly sly sot sot sot nta nta ath ath ath gma gma gma bra bra vvi ppo ppo mtr ghi ghi bna bna bna cit cit cit osa zma zma zma tae hvu sbi sbi bdi bdi cre
Symbol LOC101262638 LOC101244986 LOC101260645 LOC102593875 LOC102606340 LOC102580231 LOC107802213 LOC107830556 COPT6 COPT1 COPT2 LOC100805457 LOC100803410 LOC100801036 LOC103873286 LOC103856641 CTR3 LOC7468602 LOC18100324 LOC11442243 LOC121215527 LOC107894807 LOC106411038 LOC106433299 LOC106443264 LOC102619442 LOC102619752 LOC102623246 LOC4324610 LOC103643033 LOC100286321 LOC103646489 LOC123124804 LOC123397297 LOC8075294 LOC8077126 LOC100831592 LOC100842041 CHLRE_05g247050v5
Function* copper transporter 6 copper transporter 6 copper transporter 6-like copper transporter 5 copper transporter 6-like copper transporter 6-like uncharacterized LOC107802213 copper transporter 6-like Ctr copper transporter family copper transporter 1 copper transporter 2 copper transporter 5.1 copper transporter 6 copper transporter 5.1 copper transporter 2 copper transporter 1-like copper transporter copper transporter 1 copper transporter 5 copper transporter 5.1 copper transporter 6 copper transporter 5 copper transporter 5 copper transporter 3-like copper transporter 1 copper transporter 1 copper transporter 1-like copper transporter 5 copper transporter 1-like copper transporter 5.1 copper transporter 1 copper transporter 6-like copper transporter 5.1 copper transporter 5.1 copper transporter 6 copper transporter 5.1 copper transporter 5.1 copper transporter 3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 4
sly00195 Photosynthesis 3
sly00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 5
sot04145 Phagosome 4
sot04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 4
sot00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 7
gma04145 Phagosome 7
gma04142 Lysosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
hvu04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101262638 101244986 101260645 102593875 102606340 102580231 107802213 107830556 817239 836020 823843 100805457 100803410 100801036 103873286 103856641 100244231 7468602 18100324 11442243 121215527 107894807 106411038 106433299 106443264 102619442 102619752 102623246 4324610 103643033 100286321 103646489 123124804 123397297 8075294 8077126 100831592 100842041 5726486
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