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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7468121   E3 ubiquitin-protein ligase UPL6 
 ppo-r.4   7468121   E3 ubiquitin-protein ligase UPL6 
 ppo-m.4   7468121   E3 ubiquitin-protein ligase UPL6 
 ppo-u.5   7498237   E3 ubiquitin-protein ligase UPL6 
 gma-u.5   100787467   E3 ubiquitin-protein ligase UPL6 
 gma-u.5   100789933   E3 ubiquitin-protein ligase UPL6 
 gma-u.5   100776303   E3 ubiquitin-protein ligase UPL6 
 mtr-u.5   25486367   E3 ubiquitin-protein ligase UPL6 
 mtr-u.5   11415955   E3 ubiquitin-protein ligase UPL6 
 ath-u.5   UPL6   ubiquitin protein ligase 6 
 vvi-u.5   100243032   E3 ubiquitin-protein ligase UPL6 
 sly-u.5   101246856   E3 ubiquitin-protein ligase UPL6 
 osa-u.5   4337876   E3 ubiquitin-protein ligase UPL6 
 zma-u.5   103641081   E3 ubiquitin-protein ligase UPL6 
 zma-u.5   100502346   E3 ubiquitin-protein ligase UPL6 

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Top 50 coexpressed genes to 7468121 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7468121 (ppo-u.5 coexpression data)

CoexMap"7468121"


ppoLOC7468121 | Entrez gene ID : 7468121    
Species ppo gma mtr ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 4 3 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop04120 [list] [network] Ubiquitin mediated proteolysis (184 genes)
GO BP
GO:0000209 [list] [network] protein polyubiquitination  (88 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (340 genes)  IEA  
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (225 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024465206.1 [sequence] [blastp]
XP_024465207.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1,  cysk 1  (predict for XP_024465206.1)
cyto 6,  nucl 2,  chlo 1,  cysk 1  (predict for XP_024465207.1)
Subcellular
localization
TargetP
other 7  (predict for XP_024465206.1)
other 7  (predict for XP_024465207.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7468121

.
ppo-r.4
for
7468121

.
ppo-m.4
for
7468121

.
ppo-u.5
for
7498237

.
gma-u.5
for
100787467

.
gma-u.5
for
100789933

.
gma-u.5
for
100776303

.
mtr-u.5
for
25486367

.
mtr-u.5
for
11415955

.
ath-u.5
for
UPL6

.
vvi-u.5
for
100243032

.
sly-u.5
for
101246856

.
osa-u.5
for
4337876

.
zma-u.5
for
103641081

.
zma-u.5
for
100502346

.


Ortholog ID: 5997
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol UPL6 LOC100787467 LOC100776303 LOC101246856 LOC4337876 LOC100502346 LOC103641081 LOC103869709 LOC103839698 LOC100243032 LOC7468121 LOC7498237 LOC25486367 LOC11415955 LOC123069466 LOC123180593 LOC123426191 LOC107896582 LOC107931491 LOC106352932 LOC106434675 CHLRE_06g280300v5 LOC8080914 LOC102590690 LOC102629718 LOC100841930 LOC107792520 LOC107813587
Function* ubiquitin protein ligase 6 E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6 uncharacterized protein E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6 E3 ubiquitin-protein ligase UPL6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath04141 Protein processing in endoplasmic reticulum 2
ath03050 Proteasome 2
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 6
gma03013 Nucleocytoplasmic transport 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 7
gma00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 3
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 3
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 7
zma03015 mRNA surveillance pathway 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra04120 Ubiquitin mediated proteolysis 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo00190 Oxidative phosphorylation 2
ppo04142 Lysosome 2
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
tae03050 Proteasome 3
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna04144 Endocytosis 2
bna03015 mRNA surveillance pathway 2
bna04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 5
sbi04146 Peroxisome 3
sbi00071 Fatty acid degradation 2
sbi00410 beta-Alanine metabolism 2
sbi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 3
cit04141 Protein processing in endoplasmic reticulum 2
cit03420 Nucleotide excision repair 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820979 100787467 100776303 101246856 4337876 100502346 103641081 103869709 103839698 100243032 7468121 7498237 25486367 11415955 123069466 123180593 123426191 107896582 107931491 106352932 106434675 5720906 8080914 102590690 102629718 100841930 107792520 107813587
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