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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7469235   5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 
 ppo-r.4   7469235   5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 
 ppo-m.4   7469235   5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 
 gma-u.5   100797707   5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 
 mtr-u.5   25496155   5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 
 ath-u.5   COG0212   NagB/RpiA/CoA transferase-like superfamily protein 
 vvi-u.5   100248560   5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 
 sly-u.5   101249350   5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 
 osa-u.5   4351605   5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 
 zma-u.5   100192785   5-formyltetrahydrofolate cyclo-ligase1 

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Top 50 coexpressed genes to 7469235 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7469235 (ppo-u.5 coexpression data)

CoexMap"7469235"


ppoLOC7469235 | Entrez gene ID : 7469235    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00670 [list] [network] One carbon pool by folate (51 genes)
pop04981 [list] [network] Folate transport and metabolism (58 genes)
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (6111 genes)  IEA  
GO MF
Protein XP_002306710.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for XP_002306710.3)
Subcellular
localization
TargetP
chlo 5  (predict for XP_002306710.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7469235

.
ppo-r.4
for
7469235

.
ppo-m.4
for
7469235

.
gma-u.5
for
100797707

.
mtr-u.5
for
25496155

.
ath-u.5
for
COG0212

.
vvi-u.5
for
100248560

.
sly-u.5
for
101249350

.
osa-u.5
for
4351605

.
zma-u.5
for
100192785

.


Ortholog ID: 11807
Species ath gma sly osa zma bra vvi ppo mtr tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol COG0212 LOC100797707 LOC101249350 LOC4351605 LOC100192785 LOC103830600 LOC100248560 LOC7469235 LOC25496155 LOC123111044 LOC123395778 LOC121229628 LOC107922504 LOC106353503 LOC106353514 CHLRE_13g587450v5 LOC8079866 LOC102583821 LOC102621092 LOC100831995 LOC107813888 LOC107788183
Function* NagB/RpiA/CoA transferase-like superfamily protein 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 5-formyltetrahydrofolate cyclo-ligase1 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 uncharacterized protein 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 5
sly00630 Glyoxylate and dicarboxylate metabolism 4
sly00260 Glycine, serine and threonine metabolism 3
sly03010 Ribosome 3
sly00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
bra00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 3
vvi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
tae00670 One carbon pool by folate 2
tae04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 5
ghi00260 Glycine, serine and threonine metabolism 2
ghi00261 Monobactam biosynthesis 2
ghi00270 Cysteine and methionine metabolism 2
ghi00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 5
ghi00260 Glycine, serine and threonine metabolism 2
ghi00261 Monobactam biosynthesis 2
ghi00270 Cysteine and methionine metabolism 2
ghi00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna00030 Pentose phosphate pathway 2
bna00710 Carbon fixation by Calvin cycle 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna00030 Pentose phosphate pathway 2
bna00710 Carbon fixation by Calvin cycle 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00670 One carbon pool by folate 2
nta04981 Folate transport and metabolism 2
nta00270 Cysteine and methionine metabolism 2
nta00920 Sulfur metabolism 2
nta04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00670 One carbon pool by folate 2
nta04981 Folate transport and metabolism 2
nta00270 Cysteine and methionine metabolism 2
nta00920 Sulfur metabolism 2
nta04122 Sulfur relay system 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844007 100797707 101249350 4351605 100192785 103830600 100248560 7469235 25496155 123111044 123395778 121229628 107922504 106353503 106353514 5719434 8079866 102583821 102621092 100831995 107813888 107788183
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