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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5  7469381  probable sodium/metabolite cotransporter BASS3, chloroplastic 
 ppo-r.4  7469381  probable sodium/metabolite cotransporter BASS3, chloroplastic 
 ppo-m.4  7469381  probable sodium/metabolite cotransporter BASS3, chloroplastic 
 gma-u.5  100804604  probable sodium/metabolite cotransporter BASS3, chloroplastic 
 mtr-u.5  11435935  probable sodium/metabolite cotransporter BASS3, chloroplastic 
 ath-u.5  AT3G25410  Sodium Bile acid symporter family 
 vvi-u.5  100256899  probable sodium/metabolite cotransporter BASS3, chloroplastic 
 sly-u.5  101255826  probable sodium/metabolite cotransporter BASS3, chloroplastic 
 osa-u.5  4329356  probable sodium/metabolite cotransporter BASS3, chloroplastic 

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Top 50 coexpressed genes to 7469381 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7469381 (ppo-u.5 coexpression data)

CoexMap"7469381"


ppoLOC7469381 | Entrez gene ID : 7469381
Species ppo gma mtr ath vvi sly osa tae hvu zma ghi bdi cit bra cre sbi bna nta sot
Paralog 3 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0016020 [list] [network] membrane  (3780 genes)  IEA  
GO MF
Protein XP_002320573.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 5,  mito 2  (predict for XP_002320573.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002320573.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ppo-u.5
for
7469381

.

ppo-r.4
for
7469381

.

ppo-m.4
for
7469381

.

gma-u.5
for
100804604

.

mtr-u.5
for
11435935

.

ath-u.5
for
AT3G25410

.

vvi-u.5
for
100256899

.

sly-u.5
for
101255826

.

osa-u.5
for
4329356

.


Ortholog ID: 11965
Species ath gma sly osa bra vvi ppo mtr tae tae hvu ghi ghi bna bna sot cit nta nta
Symbol AT3G25410 LOC100804604 LOC101255826 LOC4329356 LOC103828853 LOC100256899 LOC7469381 LOC11435935 LOC123136036 LOC123131999 LOC123403244 LOC107954974 LOC121231827 LOC106405857 LOC106405860 LOC102579409 LOC102623309 LOC107827866 LOC107809266
Function* Sodium Bile acid symporter family probable sodium/metabolite cotransporter BASS3, chloroplastic probable sodium/metabolite cotransporter BASS3, chloroplastic probable sodium/metabolite cotransporter BASS3, chloroplastic probable sodium/metabolite cotransporter BASS3, chloroplastic probable sodium/metabolite cotransporter BASS3, chloroplastic probable sodium/metabolite cotransporter BASS3, chloroplastic probable sodium/metabolite cotransporter BASS3, chloroplastic probable sodium/metabolite cotransporter BASS3, chloroplastic probable sodium/metabolite cotransporter BASS3, chloroplastic probable sodium/metabolite cotransporter BASS3, chloroplastic probable sodium/metabolite cotransporter BASS3, chloroplastic probable sodium/metabolite cotransporter BASS3, chloroplastic probable sodium/metabolite cotransporter BASS3, chloroplastic probable sodium/metabolite cotransporter BASS3, chloroplastic probable sodium/metabolite cotransporter BASS3, chloroplastic probable sodium/metabolite cotransporter BASS3, chloroplastic putative sodium/metabolite cotransporter BASS3, chloroplastic putative sodium/metabolite cotransporter BASS3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01040 Biosynthesis of unsaturated fatty acids 2
vvi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00630 Glyoxylate and dicarboxylate metabolism 5
bna01200 Carbon metabolism 5
bna04146 Peroxisome 5
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 3
sot01200 Carbon metabolism 3
sot00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
cit01230 Biosynthesis of amino acids 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822125 100804604 101255826 4329356 103828853 100256899 7469381 11435935 123136036 123131999 123403244 107954974 121231827 106405857 106405860 102579409 102623309 107827866 107809266
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