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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7469500   TPD1 protein homolog 1-like 
 gma-u.5   100792919   protein TAPETUM DETERMINANT 1 
 mtr-u.5   11434106   protein TAPETUM DETERMINANT 1 
 ath-u.5   TPD1   tapetum determinant 1 
 ath-u.5   AT1G32583   tapetum determinant protein 
 bra-r.6   103874755   TPD1 protein homolog 1 
 bra-r.6   103862777   protein TAPETUM DETERMINANT 1 
 ghi-r.1   107946867   protein TAPETUM DETERMINANT 1 
 ghi-r.1   107946597   protein TAPETUM DETERMINANT 1 
 ghi-r.1   107923313   TPD1 protein homolog 1 
 bna-r.1   106375808   protein TAPETUM DETERMINANT 1 
 bna-r.1   106439015   TPD1 protein homolog 1 
 bna-r.1   125575618   TPD1 protein homolog 1-like 
 sly-u.5   101268557   protein TAPETUM DETERMINANT 1-like 
 sot-r.1   102580504   protein TAPETUM DETERMINANT 1-like 
 osa-u.5   4352199   TPD1 protein homolog 1A-like 
 zma-u.5   100286355   TPD1 
 zma-u.5   100286268   TPD1 
 hvu-r.1   123426925   TPD1 protein homolog 1A-like 
 bdi-r.1   100836193   TPD1 protein homolog 1B 

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Top 50 coexpressed genes to 7469500 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7469500 (ppo-m.4 coexpression data)

CoexMap"7469500"


ppoLOC7469500 | Entrez gene ID : 7469500    
Species ppo gma mtr ath bra ghi bna sly sot osa zma hvu bdi cre vvi nta tae cit sbi
Paralog 1 1 1 2 2 3 3 1 1 1 2 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0001709 [list] [network] cell fate determination  (9 genes)  IEA  
GO CC
GO MF
Protein XP_052312467.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1  (predict for XP_052312467.1)
Subcellular
localization
TargetP
other 8  (predict for XP_052312467.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7469500
gma-u.5
for
100792919
mtr-u.5
for
11434106
ath-u.5
for
TPD1
ath-u.5
for
AT1G32583
bra-r.6
for
103874755
bra-r.6
for
103862777
ghi-r.1
for
107946867
ghi-r.1
for
107946597
ghi-r.1
for
107923313
bna-r.1
for
106375808
bna-r.1
for
106439015
bna-r.1
for
125575618
sly-u.5
for
101268557
sot-r.1
for
102580504
osa-u.5
for
4352199
zma-u.5
for
100286355
zma-u.5
for
100286268
hvu-r.1
for
123426925
bdi-r.1
for
100836193


Ortholog ID: 2684
Species gma mtr ath ath bra bra ghi ghi ghi bna bna bna sly sot osa zma zma zma hvu bdi
Symbol LOC100792919 LOC11434106 TPD1 AT1G32583 LOC103874755 LOC103862777 LOC107946867 LOC107946597 LOC107923313 LOC106375808 LOC106439015 LOC125575618 LOC101268557 LOC102580504 LOC4352199 LOC100286268 LOC103638925 LOC103651938 LOC123426925 LOC100836193
Function* protein TAPETUM DETERMINANT 1 protein TAPETUM DETERMINANT 1 tapetum determinant 1 tapetum determinant protein TPD1 protein homolog 1 protein TAPETUM DETERMINANT 1 protein TAPETUM DETERMINANT 1 protein TAPETUM DETERMINANT 1 TPD1 protein homolog 1 protein TAPETUM DETERMINANT 1 TPD1 protein homolog 1 TPD1 protein homolog 1-like protein TAPETUM DETERMINANT 1-like protein TAPETUM DETERMINANT 1-like TPD1 protein homolog 1A-like TPD1 TPD1 protein homolog 1B TPD1 protein homolog 1B TPD1 protein homolog 1A-like TPD1 protein homolog 1B
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 3
ath00710 Carbon fixation by Calvin cycle 2
ath00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00350 Tyrosine metabolism 4
ghi00360 Phenylalanine metabolism 4
ghi00950 Isoquinoline alkaloid biosynthesis 4
ghi00960 Tropane, piperidine and pyridine alkaloid biosynthesis 4
ghi00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
bna03460 Fanconi anemia pathway 2
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01250 Biosynthesis of nucleotide sugars 2
sly00270 Cysteine and methionine metabolism 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00480 Glutathione metabolism 2
bdi00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100792919 11434106 2745725 3766880 103874755 103862777 107946867 107946597 107923313 106375808 106439015 125575618 101268557 102580504 4352199 100286268 103638925 103651938 123426925 100836193
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