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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7469552   dihydroorotase, mitochondrial 
 ppo-r.4   7469552   dihydroorotase, mitochondrial 
 ppo-m.4   7469552   dihydroorotase, mitochondrial 
 gma-u.5   100815210   dihydroorotase, mitochondrial-like 
 gma-u.5   100804389   dihydroorotase, mitochondrial 
 mtr-u.5   11444984   dihydroorotase, mitochondrial 
 ath-u.5   PYR4   pyrimidin 4 
 vvi-u.5   100245511   dihydroorotase, mitochondrial 
 sly-u.5   101249602   dihydroorotase, mitochondrial 
 osa-u.5   4325542   dihydroorotase, mitochondrial-like 
 zma-u.5   100193190   uncharacterized LOC100193190 

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Top 50 coexpressed genes to 7469552 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7469552 (ppo-u.5 coexpression data)

CoexMap"7469552"


ppoLOC7469552 | Entrez gene ID : 7469552    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00240 [list] [network] Pyrimidine metabolism (83 genes)
pop01240 [list] [network] Biosynthesis of cofactors (298 genes)
GO BP
GO:0006207 [list] [network] 'de novo' pyrimidine nucleobase biosynthetic process  (12 genes)  IEA  
GO:0006221 [list] [network] pyrimidine nucleotide biosynthetic process  (31 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (718 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (6111 genes)  IEA  
GO MF
GO:0004151 [list] [network] dihydroorotase activity  (1 genes)  IEA  
Protein XP_002310399.1 [sequence] [blastp]
XP_024460958.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  cyto 3,  cysk 2,  cyto_nucl 2  (predict for XP_002310399.1)
chlo 6,  plas 1,  nucl 1,  mito 1,  extr 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for XP_024460958.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002310399.1)
other 5  (predict for XP_024460958.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7469552

.
ppo-r.4
for
7469552

.
ppo-m.4
for
7469552

.
gma-u.5
for
100815210

.
gma-u.5
for
100804389

.
mtr-u.5
for
11444984

.
ath-u.5
for
PYR4

.
vvi-u.5
for
100245511

.
sly-u.5
for
101249602

.
osa-u.5
for
4325542

.
zma-u.5
for
100193190

.


Ortholog ID: 9606
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol PYR4 LOC100804389 LOC100815210 LOC101249602 LOC4325542 LOC100193190 LOC103861347 LOC103860587 LOC100245511 LOC7469552 LOC11444984 LOC123079024 LOC123070621 LOC123440245 LOC107911712 LOC107924314 LOC106440468 LOC111214286 CHLRE_11g467550v5 LOC8075567 LOC102595472 LOC102627324 LOC100821297 LOC107804302 LOC107807663
Function* pyrimidin 4 dihydroorotase, mitochondrial dihydroorotase, mitochondrial-like dihydroorotase, mitochondrial dihydroorotase, mitochondrial-like uncharacterized LOC100193190 dihydroorotase, mitochondrial dihydroorotase, mitochondrial dihydroorotase, mitochondrial dihydroorotase, mitochondrial dihydroorotase, mitochondrial dihydroorotase, mitochondrial dihydroorotase, mitochondrial dihydroorotase, mitochondrial dihydroorotase, mitochondrial dihydroorotase, mitochondrial dihydroorotase, mitochondrial-like dihydroorotase, mitochondrial uncharacterized protein dihydroorotase, mitochondrial dihydroorotase, mitochondrial dihydroorotase, mitochondrial dihydroorotase, mitochondrial dihydroorotase, mitochondrial-like dihydroorotase, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 5
ath00270 Cysteine and methionine metabolism 3
ath00710 Carbon fixation by Calvin cycle 3
ath01200 Carbon metabolism 3
ath01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 4
gma00240 Pyrimidine metabolism 3
gma00250 Alanine, aspartate and glutamate metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 3
gma01240 Biosynthesis of cofactors 3
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
sly01240 Biosynthesis of cofactors 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 5
osa00520 Amino sugar and nucleotide sugar metabolism 3
osa01250 Biosynthesis of nucleotide sugars 3
osa00010 Glycolysis / Gluconeogenesis 2
osa00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 3
zma00480 Glutathione metabolism 3
zma00020 Citrate cycle (TCA cycle) 2
zma00640 Propanoate metabolism 2
zma00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 4
bra01240 Biosynthesis of cofactors 4
bra00250 Alanine, aspartate and glutamate metabolism 3
bra01232 Nucleotide metabolism 2
bra00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 10
bra01210 2-Oxocarboxylic acid metabolism 6
bra00290 Valine, leucine and isoleucine biosynthesis 5
bra01240 Biosynthesis of cofactors 4
bra00770 Pantothenate and CoA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi00600 Sphingolipid metabolism 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 4
ppo00230 Purine metabolism 2
ppo01232 Nucleotide metabolism 2
ppo00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04146 Peroxisome 2
mtr01230 Biosynthesis of amino acids 2
mtr00240 Pyrimidine metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 7
tae00240 Pyrimidine metabolism 5
tae01230 Biosynthesis of amino acids 5
tae01232 Nucleotide metabolism 4
tae00300 Lysine biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 7
tae00300 Lysine biosynthesis 6
tae01240 Biosynthesis of cofactors 6
tae00230 Purine metabolism 4
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu01240 Biosynthesis of cofactors 3
hvu00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 6
ghi01240 Biosynthesis of cofactors 6
ghi00220 Arginine biosynthesis 4
ghi00250 Alanine, aspartate and glutamate metabolism 4
ghi00290 Valine, leucine and isoleucine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 3
ghi01240 Biosynthesis of cofactors 3
ghi00030 Pentose phosphate pathway 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
bna00240 Pyrimidine metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
bna00240 Pyrimidine metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 3
cre00230 Purine metabolism 3
cre01200 Carbon metabolism 2
cre01230 Biosynthesis of amino acids 2
cre00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 3
sbi00900 Terpenoid backbone biosynthesis 2
sbi00240 Pyrimidine metabolism 2
sbi04144 Endocytosis 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03013 Nucleocytoplasmic transport 4
sot03015 mRNA surveillance pathway 3
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 7
bdi00300 Lysine biosynthesis 3
bdi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 6
nta00240 Pyrimidine metabolism 4
nta01240 Biosynthesis of cofactors 4
nta00190 Oxidative phosphorylation 3
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 6
nta00240 Pyrimidine metabolism 3
nta01240 Biosynthesis of cofactors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828392 100804389 100815210 101249602 4325542 100193190 103861347 103860587 100245511 7469552 11444984 123079024 123070621 123440245 107911712 107924314 106440468 111214286 5725082 8075567 102595472 102627324 100821297 107804302 107807663
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