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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7469656   aspartate--tRNA ligase, chloroplastic/mitochondrial 
 ppo-r.4   7469656   aspartate--tRNA ligase, chloroplastic/mitochondrial 
 ppo-m.4   7469656   aspartate--tRNA ligase, chloroplastic/mitochondrial 
 ppo-u.5   7470766   aspartate--tRNA ligase, chloroplastic/mitochondrial 
 gma-u.5   100803308   aspartate--tRNA ligase, chloroplastic/mitochondrial 
 gma-u.5   100780893   aspartate--tRNA ligase, chloroplastic/mitochondrial 
 mtr-u.5   11443734   aspartate--tRNA ligase, chloroplastic/mitochondrial 
 mtr-u.5   11417726   aspartate--tRNA ligase, chloroplastic/mitochondrial 
 mtr-u.5   11415753   aspartate--tRNA ligase, chloroplastic/mitochondrial 
 ath-u.5   AT4G33760   tRNA synthetase class II (D, K and N) family protein 
 vvi-u.5   100241273   aspartyl-tRNA synthetase-like 
 sly-u.5   101259000   aspartate--tRNA ligase, chloroplastic/mitochondrial 
 osa-u.5   4324505   aspartate--tRNA ligase, chloroplastic/mitochondrial 
 zma-u.5   100382529   uncharacterized LOC100382529 

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Top 50 coexpressed genes to 7469656 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7469656 (ppo-u.5 coexpression data)

CoexMap"7469656"


ppoLOC7469656 | Entrez gene ID : 7469656    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 3 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00970 [list] [network] Aminoacyl-tRNA biosynthesis (96 genes)
GO BP
GO:0006422 [list] [network] aspartyl-tRNA aminoacylation  (3 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (6111 genes)  IEA  
GO MF
GO:0004815 [list] [network] aspartate-tRNA ligase activity  (3 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4002 genes)  IEA  
Protein XP_024463857.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 3  (predict for XP_024463857.2)
Subcellular
localization
TargetP
mito 6  (predict for XP_024463857.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7469656

.
ppo-r.4
for
7469656

.
ppo-m.4
for
7469656

.
ppo-u.5
for
7470766

.
gma-u.5
for
100803308

.
gma-u.5
for
100780893

.
mtr-u.5
for
11443734

.
mtr-u.5
for
11417726

.
mtr-u.5
for
11415753

.
ath-u.5
for
AT4G33760

.
vvi-u.5
for
100241273

.
sly-u.5
for
101259000

.
osa-u.5
for
4324505

.
zma-u.5
for
100382529

.


Ortholog ID: 7307
Species ath gma gma sly osa zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi cit bdi nta nta
Symbol AT4G33760 LOC100780893 LOC100803308 LOC101259000 LOC4324505 LOC100382529 LOC103849071 LOC103844519 LOC100241273 LOC7469656 LOC7470766 LOC11443734 LOC11417726 LOC123060246 LOC123068754 LOC123442788 LOC107922631 LOC107925479 LOC106361090 LOC106354453 CHLRE_09g390986v5 LOC8059137 LOC102618078 LOC100829593 LOC107826713 LOC107812591
Function* tRNA synthetase class II (D, K and N) family protein aspartate--tRNA ligase, chloroplastic/mitochondrial aspartate--tRNA ligase, chloroplastic/mitochondrial aspartate--tRNA ligase, chloroplastic/mitochondrial aspartate--tRNA ligase, chloroplastic/mitochondrial uncharacterized LOC100382529 aspartate--tRNA ligase, chloroplastic/mitochondrial aspartate--tRNA ligase, chloroplastic/mitochondrial aspartyl-tRNA synthetase-like aspartate--tRNA ligase, chloroplastic/mitochondrial aspartate--tRNA ligase, chloroplastic/mitochondrial aspartate--tRNA ligase, chloroplastic/mitochondrial aspartate--tRNA ligase, chloroplastic/mitochondrial aspartate--tRNA ligase, chloroplastic/mitochondrial aspartate--tRNA ligase, chloroplastic/mitochondrial aspartate--tRNA ligase, chloroplastic/mitochondrial aspartate--tRNA ligase, chloroplastic/mitochondrial aspartate--tRNA ligase, chloroplastic/mitochondrial aspartate--tRNA ligase, chloroplastic/mitochondrial aspartate--tRNA ligase, chloroplastic/mitochondrial uncharacterized protein aspartate--tRNA ligase, chloroplastic/mitochondrial aspartate--tRNA ligase, chloroplastic/mitochondrial aspartate--tRNA ligase, chloroplastic/mitochondrial aspartate--tRNA ligase, chloroplastic/mitochondrial aspartate--tRNA ligase, chloroplastic/mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 6
gma03018 RNA degradation 2
gma00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
gma00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 7
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 5
bra01210 2-Oxocarboxylic acid metabolism 3
bra01230 Biosynthesis of amino acids 3
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 6
tae01240 Biosynthesis of cofactors 4
tae00860 Porphyrin metabolism 3
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 6
tae01240 Biosynthesis of cofactors 5
tae00860 Porphyrin metabolism 3
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00440 Phosphonate and phosphinate metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 5
cre01230 Biosynthesis of amino acids 4
cre00260 Glycine, serine and threonine metabolism 3
cre00300 Lysine biosynthesis 2
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 4
bdi00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 8
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829518 100780893 100803308 101259000 4324505 100382529 103849071 103844519 100241273 7469656 7470766 11443734 11417726 123060246 123068754 123442788 107922631 107925479 106361090 106354453 5720644 8059137 102618078 100829593 107826713 107812591
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