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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7470189   uncharacterized LOC7470189 
 ppo-r.4   7470189   uncharacterized LOC7470189 
 ppo-m.4   7470189   uncharacterized LOC7470189 
 gma-u.5   100789294   50S ribosomal protein L24 
 gma-u.5   100499816   uncharacterized LOC100499816 
 mtr-u.5   25483103   50S ribosomal protein L24 
 ath-u.5   AT5G23535   KOW domain-containing protein 
 vvi-u.5   100852679   uncharacterized LOC100852679 
 sly-u.5   101268212   uncharacterized LOC101268212 
 osa-u.5   4351443   uncharacterized LOC4351443 
 osa-u.5   4349726   uncharacterized LOC4349726 
 zma-u.5   100274273   50S ribosomal protein L24-like 

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Top 50 coexpressed genes to 7470189 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7470189 (ppo-u.5 coexpression data)

CoexMap"7470189"


ppoLOC7470189 | Entrez gene ID : 7470189    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03010 [list] [network] Ribosome (698 genes)
GO BP
GO:0006412 [list] [network] translation  (598 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (453 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (675 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
Protein XP_002305718.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  nucl 1  (predict for XP_002305718.1)
Subcellular
localization
TargetP
other 6,  mito 5  (predict for XP_002305718.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7470189

.
ppo-r.4
for
7470189

.
ppo-m.4
for
7470189

.
gma-u.5
for
100789294

.
gma-u.5
for
100499816

.
mtr-u.5
for
25483103

.
ath-u.5
for
AT5G23535

.
vvi-u.5
for
100852679

.
sly-u.5
for
101268212

.
osa-u.5
for
4351443

.
osa-u.5
for
4349726

.
zma-u.5
for
100274273

.


Ortholog ID: 5839
Species ath gma gma sly osa osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi nta nta
Symbol AT5G23535 LOC100789294 LOC100499816 LOC101268212 LOC4349726 LOC4351443 LOC100274273 LOC103874225 LOC103865527 LOC100852679 LOC7470189 LOC25483103 LOC123096597 LOC123086375 LOC123448185 LOC107922726 LOC107923347 LOC125577738 LOC106428430 CHLRE_07g330450v5 LOC8071432 LOC8085621 LOC102590082 LOC102580372 LOC102630763 LOC100842078 LOC107769620 LOC107762564
Function* KOW domain-containing protein 50S ribosomal protein L24 uncharacterized LOC100499816 uncharacterized LOC101268212 uncharacterized LOC4349726 uncharacterized LOC4351443 50S ribosomal protein L24-like 50S ribosomal protein L24 50S ribosomal protein L24 uncharacterized LOC100852679 uncharacterized LOC7470189 50S ribosomal protein L24 50S ribosomal protein L24 50S ribosomal protein L24 50S ribosomal protein L24 50S ribosomal protein L24 uncharacterized LOC107923347 50S ribosomal protein L24-like 50S ribosomal protein L24-like uncharacterized protein 50S ribosomal protein L24 50S ribosomal protein L24 50S ribosomal protein L24-like 50S ribosomal protein L24 uncharacterized LOC102630763 50S ribosomal protein L24 uncharacterized LOC107769620 uncharacterized LOC107762564
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 11
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 16
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
bra00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi04626 Plant-pathogen interaction 4
ghi03010 Ribosome 2
ghi00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi00061 Fatty acid biosynthesis 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 2
cre04145 Phagosome 2
cre03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 12
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot03040 Spliceosome 3
sot03020 RNA polymerase 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03040 Spliceosome 3
nta03018 RNA degradation 2
nta03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832419 100789294 100499816 101268212 4349726 4351443 100274273 103874225 103865527 100852679 7470189 25483103 123096597 123086375 123448185 107922726 107923347 125577738 106428430 5716174 8071432 8085621 102590082 102580372 102630763 100842078 107769620 107762564
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