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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7470397   proteasome subunit alpha type-7 
 ppo-r.4   7470397   proteasome subunit alpha type-7 
 ppo-m.4   7470397   proteasome subunit alpha type-7 
 ppo-u.5   7494252   proteasome subunit alpha type-7 
 gma-u.5   100808731   proteasome subunit alpha type-7 
 gma-u.5   100790481   proteasome subunit alpha type-7 
 mtr-u.5   25485960   proteasome subunit alpha type-7 
 mtr-u.5   11444325   proteasome subunit alpha type-7 
 ath-u.5   PAD1   20S proteasome alpha subunit PAD1 
 ath-u.5   PAD2   proteasome alpha subunit D2 
 vvi-u.5   100257349   proteasome subunit alpha type-7 
 vvi-u.5   100262480   proteasome subunit alpha type-7 
 sly-u.5   PAD1   proteasome alpha subunit 
 osa-u.5   4347710   proteasome subunit alpha type-7-B-like 
 osa-u.5   4346245   proteasome subunit alpha type-7-A-like 
 zma-u.5   100193583   uncharacterized LOC100193583 
 zma-u.5   100191224   proteasome subunit alpha type 
 zma-u.5   100037815   Proteasome subunit alpha type 

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Top 50 coexpressed genes to 7470397 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7470397 (ppo-u.5 coexpression data)

CoexMap"7470397"


ppoLOC7470397 | Entrez gene ID : 7470397    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 2 2 2 1 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03050 [list] [network] Proteasome (82 genes)
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (340 genes)  IEA  
GO CC
GO:0019773 [list] [network] proteasome core complex, alpha-subunit complex  (15 genes)  IEA  
GO:0005839 [list] [network] proteasome core complex  (29 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
Protein XP_002305514.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 1,  pero 1,  mito 1,  cysk_nucl 1  (predict for XP_002305514.1)
Subcellular
localization
TargetP
other 8,  mito 4  (predict for XP_002305514.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7470397

.
ppo-r.4
for
7470397

.
ppo-m.4
for
7470397

.
ppo-u.5
for
7494252

.
gma-u.5
for
100808731

.
gma-u.5
for
100790481

.
mtr-u.5
for
25485960

.
mtr-u.5
for
11444325

.
ath-u.5
for
PAD1

.
ath-u.5
for
PAD2

.
vvi-u.5
for
100257349

.
vvi-u.5
for
100262480

.
sly-u.5
for
PAD1

.
osa-u.5
for
4347710

.
osa-u.5
for
4346245

.
zma-u.5
for
100193583

.
zma-u.5
for
100191224

.
zma-u.5
for
100037815

.


Ortholog ID: 3701
Species ath ath gma gma sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit cit bdi bdi nta nta
Symbol PAD2 PAD1 LOC100808731 LOC100790481 PAD1 LOC4347710 LOC4346245 LOC100193583 LOC100037815 LOC103841046 LOC103860701 LOC100257349 LOC100262480 LOC7470397 LOC7494252 LOC11444325 LOC25485960 LOC123166017 LOC123104607 LOC123407500 LOC123400156 LOC107927819 LOC107908656 LOC111200303 LOC106448184 CHLRE_01g030850v5 LOC8057847 LOC8070910 LOC102596046 LOC102628944 LOC102607975 LOC100832386 LOC100839843 LOC107803419 LOC107823402
Function* proteasome alpha subunit D2 20S proteasome alpha subunit PAD1 proteasome subunit alpha type-7 proteasome subunit alpha type-7 proteasome alpha subunit proteasome subunit alpha type-7-B-like proteasome subunit alpha type-7-A-like uncharacterized LOC100193583 Proteasome subunit alpha type proteasome subunit alpha type-7-A proteasome subunit alpha type-7-A proteasome subunit alpha type-7 proteasome subunit alpha type-7 proteasome subunit alpha type-7 proteasome subunit alpha type-7 proteasome subunit alpha type-7 proteasome subunit alpha type-7 proteasome subunit alpha type-7-A proteasome subunit alpha type-7-B proteasome subunit alpha type-7-A proteasome subunit alpha type-7-B proteasome subunit alpha type-7 proteasome subunit alpha type-7 proteasome subunit alpha type-7-A-like proteasome subunit alpha type-7-A uncharacterized protein proteasome subunit alpha type-7-A proteasome subunit alpha type-7-B proteasome subunit alpha type-7-like proteasome subunit alpha type-7 proteasome subunit alpha type-7 proteasome subunit alpha type-7-B proteasome subunit alpha type-7-A proteasome subunit alpha type-7 proteasome subunit alpha type-7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 10
gma01210 2-Oxocarboxylic acid metabolism 3
gma01230 Biosynthesis of amino acids 3
gma00290 Valine, leucine and isoleucine biosynthesis 2
gma00660 C5-Branched dibasic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 9
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 17
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 15
bra00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 7
ppo03018 RNA degradation 3
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 15
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 10
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 18
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 8
ghi04626 Plant-pathogen interaction 4
ghi04075 Plant hormone signal transduction 2
ghi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 8
ghi04626 Plant-pathogen interaction 4
ghi04075 Plant hormone signal transduction 2
ghi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
sbi03050 Proteasome 3
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 13
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 13
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 11
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 11
nta04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 12
nta04144 Endocytosis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836746 824289 100808731 100790481 544128 4347710 4346245 100193583 100037815 103841046 103860701 100257349 100262480 7470397 7494252 11444325 25485960 123166017 123104607 123407500 123400156 107927819 107908656 111200303 106448184 5715374 8057847 8070910 102596046 102628944 102607975 100832386 100839843 107803419 107823402
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